Salvia splendens (scarlet sage): 121801125
Help
Entry
121801125 CDS
T07627
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121801125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121801125
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121801125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
121801125
NCBI-ProteinID:
XP_042056514
LinkDB
All DBs
Position
1:complement(43539600..43541950)
Genome browser
AA seq
373 aa
AA seq
DB search
MDDSEQNKLFVGGISWDTTDDVLRDHFGKYGVVVDSVIARDRDSGRPRGFSFVTFSESSA
VDRALQDSHQILSRTVEVKRAIPRSEQQSQQQNNRGLSRNNSRANSRSNEQFRTKKIFVG
GLSANLSEEEFRGYFENFGRITDVVVMHDNLTHRPRGFGFITFDSEDSVEEVMQKNFHEL
TGKLVEVKRAVPKDGLGSCSVGYNGRLGGGRSHTSFNFYQQGSYTPYSSRFGYFPGYGGN
VAGYPYGAGIFGGGYPPSGGYGGISYSLTPIAPRSPWNPAMVGVRGSFLPYGSCAPVYPS
YVNGGPGVMGLSINGYGGILGGDAQHTAESAPPQTGINNVDANSFGSGRNFGGVASKQSH
RVSDMSYQAANSS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcggagcagaataagctgtttgtcgggggaatttcgtgggacacgacggac
gatgtgctcagggaccattttggcaagtacggcgtcgttgtggactccgtgattgctcgg
gatcgggattccgggcgccccaggggcttctctttcgtcaccttttcggaatcttccgcc
gtcgaccgcgctctgcaggattcccatcaaattctcagcagaacggtggaagtcaaaagg
gccattcccagaagcgaacaacaaagtcaacaacagaataacaggggattgagtaggaat
aatagtagggctaacagtaggagcaacgagcagtttaggacaaagaagatttttgtaggg
ggtttatcggctaacttgagtgaagaagaattcagaggttactttgagaactttggtagg
attactgatgtagttgtgatgcatgataatctgactcataggccgaggggatttggtttt
attacctttgactcagaggattctgtagaggaagttatgcagaagaatttccatgaattg
actggaaagcttgttgaggttaaaagagcggtgccaaaggatggacttggtagttgtagc
gttggttataatggaagattaggtggcggaagaagccatactagcttcaatttttatcag
caggggagttacacaccttatagttctagatttgggtatttccctgggtatggtggtaat
gtggctggctacccatatggagctgggatatttggtggtggatatcctccttctggaggg
tatggcggaattagttacagtctcactccaattgccccgaggagtccttggaatccagcg
atggttggtgtcaggggaagtttcctgccttatggaagttgtgctcctgtctatccctcc
tatgtgaatggcgggcctggagtgatgggactgtctattaacggatatggtgggatcttg
ggtggagatgctcaacacacggctgaatcagcaccccctcagactggtataaataatgta
gatgccaattcttttggttctggaagaaactttggaggtgtggctagcaaacagagtcac
agagttagtgatatgtcttaccaagctgctaactcaagctga
DBGET
integrated database retrieval system
