Salvia splendens (scarlet sage): 121801224
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Entry
121801224 CDS
T07627
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121801224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121801224
Spliceosome [BR:
sspl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121801224
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
121801224
NCBI-ProteinID:
XP_042056604
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Position
4:6581475..6585187
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AA seq
482 aa
AA seq
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MATLNDSFLADLDELSDNEDDLLEADNDDAEHMEEDIDGDLADIEALNYDDLDSVSKLQK
TQRFTDIMQKVEDALENGSENSTHGIVLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIANEMDLTLVDLEGFLPSAIIMVVSVTASTTSGKP
LPEDVLQKTIDACDRALALDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKIIGTAGGL
SALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQSTPPSLRMRACRLLASK
STLAARVDSTRGDPAGKTGRTLRAEIHKKIEKWQEPPPAKQPKPLPVPDSEPRKKRGGRR
LRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAA
KVAKKFKDRSYGTSGATSGLTSSLAFTPVQGIELSNPQANQFGGTQSTYFSETGTFSKIK
RT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctgaatgactcttttctggctgatcttgatgaattgtctgataatgaagat
gatcttctggaagcagataacgacgatgctgagcacatggaagaagatatagatggtgat
ttagctgatatagaagcacttaactatgatgatcttgacagtgtgtcgaaactacaaaaa
actcagcgatttactgacatcatgcagaaagtggaagatgcattggaaaatgggtctgag
aactccactcatggaattgttttggaagatgatccagagtatcagttgatagttgattgt
aatgccttgtctgtcgatattgaaaatgagattgtgataattcacaatttcatccgtgac
aagtatcgcttgaaatttccagaacttgaatctcttgtgcaccacccaattgattatgcc
cgggttgttaaaaagattgctaatgaaatggatctgacacttgttgatcttgaaggattt
ttaccatctgctattattatggtggtttctgtcacagcatcaactactagtggaaagcct
cttccggaggatgtcttgcaaaagacaattgatgcgtgtgatcgcgcacttgctctagat
tctgcaaagaaaaaggttcttgattttgtggagagtcgaatggggtatattgctccaaat
ctatcagccatagttggaagtgctgttgccgcaaaaataattggtacagctggtggtctt
tcggcattagcaaaaatgcctgcatgcaacgttcagcttcttggtgccaaaaagaagaat
ttagctgggttttcaacagcaacatcccaatttcgtgttggctatttggagcaaactgag
attttccagagtactcctccttccttaagaatgcgtgcttgtcgacttttggcttcaaaa
tccactcttgctgcacgtgtagactctactaggggagacccagctggaaaaactgggaga
actttgcgcgcagagattcacaaaaagatagagaagtggcaagagccgcctcctgctaag
cagcctaaaccacttccggttcctgattctgagcccagaaagaagagaggcggtcggcgt
ttaaggaagatgaaagaaagatatgctattacagacatgcggaagctggctaacaggatg
cagtttgggataccagaggagagttcactaggtgatggacttggcgaaggttatggaatg
ctcggtcaggctggtagcggaaagcttcgtgtatctgttggacagagcaaacttgctgcg
aaagtagccaagaagtttaaggacaggagttatggaaccagtggcgcaacttctggactg
acatcaagtctggctttcacacccgtgcagggtatcgagctctcaaatcctcaggcgaac
cagtttggaggaactcagagtacttatttttcagagactggaactttttcgaagatcaag
agaacataa
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