Salvia splendens (scarlet sage): 121801276
Help
Entry
121801276 CDS
T07627
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121801276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121801276
03110 Chaperones and folding catalysts [BR:
sspl03110
]
121801276
03029 Mitochondrial biogenesis [BR:
sspl03029
]
121801276
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121801276
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
121801276
Messenger RNA biogenesis [BR:
sspl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
121801276
Chaperones and folding catalysts [BR:
sspl03110
]
Heat shock proteins
HSP60 / Chaperonin
121801276
Mitochondrial biogenesis [BR:
sspl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
121801276
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121801276
Exosomal proteins of other body fluids (saliva and urine)
121801276
Exosomal proteins of breast cancer cells
121801276
Exosomal proteins of colorectal cancer cells
121801276
Exosomal proteins of bladder cancer cells
121801276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
121801276
NCBI-ProteinID:
XP_042056664
LinkDB
All DBs
Position
4:complement(36072667..36076690)
Genome browser
AA seq
579 aa
AA seq
DB search
MYRFAANLASKASVARNSSQQIGGRLGWSRNYAAKDIRFGVEARALMLKGVEELADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYISPYFITNQK
TQKCELDDPLILIHEKKISSINAIVKVLELALKRQRPLLIVAEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKSGLQDLAVLTGGQVITEELGMNLDDVELDMLGSCKKVTISKDD
TVILDGSGEKKSIEERCEQIRSAVELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYAAKELEKLPTANFDQKIGVQIIQNALKT
PVFTIAANAGVEGAVVVGKLLESENPDLGYDAAKAEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAIVVEQPSEEKAGPPMGGGGMGGMGGMDY
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcagcaaatctcgcctccaaagccagtgttgcgaggaacagcagccaa
cagattgggggtagattgggatggagcagaaattatgctgctaaagatattagatttgga
gtggaggctagggctttgatgcttaagggtgttgaagagcttgctgatgctgttaaagtc
accatgggtcctaaggggcgtaatgtagttattgagcagagttggggtgcgccgaaagtg
acgaaggacggtgtcactgttgcgaagagcattgaattcaaggacaaagttaagaatatt
ggtgctagccttgttaaacaggtggcaaatgctactaatgatgttgctggtgatggtaca
acctgtgctactgtccttactcgtgcaatattcaccgaaggctgcaagtcagtggcagct
ggcatgaatgccatggatctaagacgcgggatcaccatggctgttgatgctgtcgttaca
aacttgaaaagcagagcaaggatgattagcacatcggaggagattgctcaggttggaact
atttctgctaatggagaaagggaaatcggtgagctgattgcaaaggctatggaaaaagtt
ggaaaagagggtgtgatcacaattcaagatggaaagacattgttcaatgagttggaagta
gttgagggtatgaagctggacagaggctatatctccccatactttatcacaaatcagaag
actcagaaatgtgaattggatgatcctcttatccttattcacgagaagaaaatctctagc
ataaatgccattgttaaagtcctagaattagctttgaagaggcagaggccacttctgata
gtcgctgaggatgtggaaagcgatgcacttgccactcttatccttaacaagctccgtgct
ggaatcaaggtctgtgcaatcaaagcacctgggttcggcgagaacaggaaatcaggcttg
caggatcttgctgttttaaccggtggccaagtcataaccgaggagcttggaatgaacttg
gatgatgtggagcttgatatgttgggttcgtgcaagaaggtcaccatctccaaggatgat
actgtcattcttgatggatctggtgagaagaagtccattgaggaaagatgtgagcagatc
aggtcagcagttgagttgagcacttctgattacgacaaggagaagttgcaagaaaggctg
gccaaattatctggtggtgttgctgtgctaaagattggaggagcaagtgaagcagaagtt
ggtgagaagaaagatagagtaactgatgctcttaatgccacgaaagcagctgttgaggaa
gggattgtgcctggtggaggtgttgctctcctctacgcagccaaagaattggagaagctg
ccaacagccaacttcgaccagaagattggtgtccaaattattcaaaatgctttgaagaca
ccagttttcacaattgcagcaaacgctggtgtggagggtgctgttgtagttggcaaattg
ttggaatccgaaaatcctgacctcggatatgatgcagctaaagctgaatatgttgatatg
gttaaggctggaattattgatccattgaaggtcattagaactgcccttgttgatgctgct
agtgtgtcttcgctgatgacaactacggaagccattgtggtggagcaaccgtcagaggag
aaggccggaccaccaatgggcggcggcggcatgggaggaatgggtggcatggattactga
DBGET
integrated database retrieval system
