Salvia splendens (scarlet sage): 121801469
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Entry
121801469 CDS
T07627
Name
(RefSeq) zinc finger matrin-type protein 2-like isoform X1
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121801469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121801469
Spliceosome [BR:
sspl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
121801469
Complex C
U4/U6.U5 tri-SnRNP related factors
121801469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
C2H2-zf_KIN17
SNRNP27
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
121801469
NCBI-ProteinID:
XP_042056900
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All DBs
Position
4:17561214..17565084
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AA seq
202 aa
AA seq
DB search
MSQSGNGAAGIDNTFRKKFDREEYLQRARDREAKEEARNKSKSSGPPVQRKPLKHRDYEV
DLESRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRSER
ATLEQVQQRFEVLKKRKDTPGFTEQDFDERILKQQQEEEERKRQRREKKKEKKKEKAVEE
EPEIDPDVAAMMGFGGFGSSKK
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatctggcaacggcgctgctggaattgataacactttcagaaaaaaattcgac
cgagaggagtatctgcaacgcgctcgggaccgcgaagctaaggaagaagctcggaacaaa
tcaaaatcaagtggtccaccagtgcaaaggaaaccattgaagcacagagattatgaagtg
gaccttgaatcacgcctggggaagactcaggtcgtgactcctattgcacccctcagtcag
caggctggatactactgctcagtttgcgaatgtgtagttaaagattcagcaaactacttg
gatcatattaatggaaagaaacatcaacgagctttgggaatgtccatgcggtccgaaagg
gcaactttggagcaggtccagcagcggtttgaggttctcaaaaagaggaaagatactcca
ggctttacagagcaagactttgatgagcggatcctaaaacaacaacaagaagaggaggaa
agaaagcgtcagcgtcgagagaaaaagaaagagaagaagaaagagaaggcagtagaggag
gaacctgagatcgaccctgatgttgcagctatgatgggattcggaggttttggatcgtcg
aagaagtga
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