Salvia splendens (scarlet sage): 121801825
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Entry
121801825 CDS
T07627
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121801825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121801825
Spliceosome [BR:
sspl03041
]
Complex A
Other components
Complex A specific factors
121801825
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
PHD_4
RRM_5
KH_PNO1_2nd
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
121801825
NCBI-ProteinID:
XP_042057184
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Position
5:40927216..40931661
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AA seq
771 aa
AA seq
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MDTLQSNYTDSPSQPQSEPQSQPPYPNFPQSETPKKTLDSSTNGVAAAAAFLPAPKSENG
LSKTHSGTADKDVSCGDEETTSRRRRRSRWDPPPSDSGNDGADGNSGAGGRKRKSRWADD
EPKPVIQLPDFMKDFAGGIEFDPEIQALNSRLLEISRKLQSGLLLDDLPEGARSPSPEPI
YDNMGVRINTREYRAREKLNRERQEIISQIIKKNPAFKPPADYRPPKLYKKLYIPMKEYP
GYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLV
EADTQDALDAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQ
YACPSRTSTFKSDVLCKICGDGGHPTIDCPVKNTTGKKMDDEYQNFLAELGGTGPESSIK
SSSATLALPGGSGMNPPWASSTDSVSNTTQAGLGSTLIKPKEFDETNLYIGYLPPTLEDD
GLISLFSPFGEIVMAKVIKDRVSGLSKGYGFVKYADVQQANSAIASMNGHRLDGRTIAVR
IAGKPPQPTGPPGPPAPPMSAYPTPNQPISAYPSQQYNAGGPIGSAPPGIYPGAPVPWGP
PPPPSYSPYPPPPPGSTMYPPVPGQAVHQYGMQYPPPPMPPGSSDVQTQAVSATDSQQSF
ASSAEMQQSYPPGVQSQSSAPVQSLPTYAYGISASSMLPPNPQVPYPMPPYSYPPHYGAV
PPPPPAAPQSSGDPSQGLSNVPWSSNPSVPPPPPPADSTDSEYEKFMAEMK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggatactcttcaatccaactacaccgattccccctctcagccccaatccgaaccccaa
tctcaacccccataccccaattttccccaatccgaaacccccaaaaaaaccctagattct
tccaccaatggagtcgccgccgccgccgctttcttgcccgccccgaagtcggagaatggt
ctctcgaaaacgcacagtggcaccgccgacaaagacgtatcctgcggcgatgaggaaacg
actagccgcaggcggaggcggtccaggtgggacccgcccccaagcgactccggcaacgac
ggcgcggatggaaattcgggagctggtgggaggaagcggaagtcgaggtgggcagatgac
gagccgaagccggtgatccagctgcctgatttcatgaaggacttcgctggaggtattgaa
ttcgatcccgagatccaagctttgaacagtaggttgcttgagattagtcgtaagttgcaa
tcgggtttgctattggatgatctgcccgagggtgctaggtcgccctcccccgaacctatt
tatgataacatgggagtgaggattaatactagggagtatcgtgctagagagaagctgaat
agggagaggcaagagattatatcacagattattaagaagaatcctgcgtttaagccccct
gcggattataggccgcctaagctttataagaagctatacataccgatgaaagagtacccg
gggtataattttattgggttgattattggtccgagaggaaacactcagaagaggatggaa
agagagactggtgcgaagattgttatccggggcaaagggtcagtgaaggaaggaaggttg
cagcagaaaagggatttgaagcctgatccctcggaaaatgaggatttgcatgtgctggtg
gaggctgacactcaggatgctcttgatgctgctgcgggtatggtggagaagctcttgcag
ccagttgatgaggtccttaatgagcacaagaggcagcaacttagggaacttgctgcgttg
aatggtactattagagatgaggagtattgtaggttgtgcggggagcctggccatcgacag
tatgcatgtccttcccggacttcaactttcaagagtgatgttttgtgtaagatttgcggt
gatggtgggcatcctactattgattgcccggtgaagaatactactggcaagaaaatggat
gatgagtatcagaacttcctggcagaacttggaggaactggtccagagtcttcaatcaag
tcgagctctgcaacgcttgcacttcccgggggttcaggtatgaatcctccttgggcaagt
tctaccgactctgtgagtaacaccacacaagctggtcttggatcaacactgatcaagcca
aaagaattcgatgagaccaacttatacataggttatttgcctcccactctggaggatgat
ggactgatcagtttgttttctccctttggtgaaattgtgatggctaaagttataaaagac
cgtgtgtctggtttgagcaagggttatggctttgtgaagtatgctgatgttcagcaggcg
aatagtgcgattgcaagcatgaatggacacaggttagatgggagaacaattgctgtgcga
atcgcaggtaaaccacctcagcccacagggcctccaggccctcctgctccacctatgtca
gcatatcctactccaaatcagcctatcagtgcctacccctcccagcagtacaatgctggt
ggtcccatcggaagtgcaccacctggtatctatcctggggcaccagttccttggggacct
ccgccacctccttcatattccccgtatcctcctcctccaccaggatcgacaatgtaccct
ccagttccaggtcaagcagttcatcaatatggaatgcaatatcctccgcctccaatgcct
ccaggttcctctgatgtccagactcaggctgtctctgccaccgactcacagcaaagtttt
gcatcttctgctgaaatgcagcaaagttaccctccaggagtacaatctcagagtagtgct
ccagttcaatctcttccaacttatgcctatggcatttctgcttcttcaatgttaccacca
aatccccaggttccttacccaatgcctccatatagctatccacctcattatggtgctgtt
ccgccaccccctcctgctgcacctcagtcttctggggacccttctcaaggcttgagtaat
gttccgtggtcctcgaatccatctgtgcctcctccaccaccaccggctgacagcacagat
tctgaatatgagaagttcatggcagaaatgaaataa
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