Salvia splendens (scarlet sage): 121801888
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Entry
121801888 CDS
T07627
Name
(RefSeq) uncharacterized protein LOC121801888 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121801888
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
121801888
Surveillance factors
Other surveillance factors
121801888
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
121801888
NCBI-ProteinID:
XP_042057277
LinkDB
All DBs
Position
5:complement(41667664..41675030)
Genome browser
AA seq
1554 aa
AA seq
DB search
MAESKLDLPEDLIGSKPADQSWIPKASTGNDEDKGLMGSLDESKDQAASEIPLSPQWLYA
KPNEPKMEARGPSSLSLGTSADLNQKEVWRSDVPEEKKDWRKIAPEPDSARRWREEERET
GTFGRKDRRKMDRRVDNAPAREPTENRSLPATDRWHDANIRSAGHETRRDSKWSLRWGPD
DKEKDSRGDKRTDVEKEESHNESQSFVSNSRSGPERETDSRDKWRPRHRMEGNPAGSGQR
TAPGFGPERGRVDGSNVGFTVGRGRSSASIGRPSSSSPIGAAQCDKNGNFVYPRGKLLDI
YRKQKLESSLAPVPETFEEVPTITQLEAAEPLAFVAPEAEQEAVLSDIWKGKITSSGALY
SALKTGRSGDSFSEVADVEFSNGRQVSFSAGVTEDIPDNFDKSSADIHEASVDSIFYDTS
SKGGLLNEKTVNYEEQYEVLENINGKELDIGRLQALNGAQYGELQLKVAGPAVNHYPLFE
SIQSVSPFDVNNKLRESNSLLSVQTSEQFWSDELPKTGSRANEYQLDRGIPPEELSLYYQ
DPQGEIQGPFLGVDIISWFEQGFFGADLPVRLEDAPDDSPFLELGDVMPQLKFGHEYGSG
NELSSNLEKSVVMEGASETCLQAGAPVPESVSSTVVDGSRWQLHEFDNIPSHQGQSNLPD
SHRHLPQHMHSQGKDFNDFGVQDEEIVFPGRPGSGGGAIGKMSRVYGESATNSGNQLHLP
HEMTESGLSNQNDNKMNPFRWSELASTHTRSEQAPPFSGGVQEKLVNAGPGGRLSPFSAM
ATQAHAPEAWNDAFGSSSHSYQDVMDGRLSSRMDQEFSQFDIAEKLLQQQLQQQHLQQHG
VVPSLNTRMSDAMLEGAPSTKLMHHKQLGNQMGQDMEHLLALQRQQQRQIQLQQQQQLQQ
QEQFHQQQMLLKEQQQSQARQALLEQLLQSQMRESGRGQSRAALEQALLKQQILNDRQQR
SQFPSRHSDPSLEQLIQAKFGQVPHQGHQNDLVDLLSRGRHGQIHPLDQQIIQQDQLHGR
QLPLGLRQRLEMEERPIKTGWSLDDVGNFHRNPSASNRAITAGFGPLDFYSQQIPPPEEH
LNLLERNLSVHDRLQHGLYEPGMLPFERSMSLPVGPAGVNRDVVNSLARGLEMQEQIARI
QSSGQGGGFSSGMFSQHINHPLHSNQFHDSRMDTTEGHWSDSNGHLPNDWMESRVQQHLH
NERQRREIDAKRNTEDPSLWMSAGSNEDSSKRLLMELLQQKTGHASSDHADMINGVPNER
RPPSGHRHRSMSNQSFGALSDQESGFNNSFTVGSFNSDSGLPPQNRPSEGISSILEIDGL
PYRSKGGGMIAAAVDEGIISDAQEGLIEQAGLTSNDRGEREMPVNVLSRNKSLGSAGFQN
IKIGSDDSVPEDAAKDRLRSSSSKGPENVLLRRPPAARAASSQEALSELNVDSVRGKSVS
STVTPDGVRREVGVIAVGNVEAASRRDVQFRRTSSCNDADVLETSFSDMLKSSAKKPTPQ
ETHASAAASEALDGASGARNKKKGKKGRQIDPALLGFKVTSNRIMMGEIQHVED
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagtaagctggatctcccggaggatctcatcggttcgaagccggccgatcaa
tcttggattccgaaagcttccactggaaatgatgaggacaaggggttgatgggatcactg
gatgagtcaaaggatcaagcagcttctgagattcctctgtccccacagtggctgtatgct
aagccaaatgagccaaaaatggaagcccgtggcccaagttctctgtctcttggcacctct
gctgatttgaaccaaaaggaggtttggcgctcagatgttcctgaggaaaaaaaagattgg
agaaagattgctcctgaacctgacagtgctcgccgctggcgtgaagaagaaagggaaact
ggaacgtttgggcgaaaggatcgcaggaagatggacagacgggttgacaatgctccggcc
agagaacctactgagaacagatctttgccagcaactgacaggtggcatgatgctaatatt
cgcagtgctggccatgaaacaaggcgtgatagcaaatggtctttaaggtggggccctgat
gacaaagaaaaggattctcggggggataaaaggacagatgtggagaaggaagagtcccat
aatgaaagccaatcatttgtttcaaatagtcgttctggtcctgagcgtgaaactgattct
cgtgataagtggaggcctcggcataggatggaggggaatcctgctggatctggtcaacgc
actgctcctggatttggacctgaaaggggaagagttgatggctcaaatgtgggctttact
gtagggcgtggtagatcttctgcttccattggaagaccttcatcatcttctccaattggt
gctgctcagtgtgataaaaatggaaattttgtttaccccagaggcaaactacttgacata
tatcgtaagcaaaagctggagtcatcccttgcccctgtgccagaaacttttgaggaagta
cccacaataactcaattagaggctgcagaacctttagcttttgttgctccagaggctgag
caagaggctgtactgagtgacatatggaagggtaaaataactagcagtggagccttgtac
agtgcacttaagacgggcagatctggtgatagcttttcagaagtggcagacgttgaattc
tccaacggaagacaggtttccttctctgctggtgtcactgaagatataccagataacttc
gataaatcatcagctgatattcatgaagctagtgttgatagcatattctacgatacttca
tcaaaaggaggcctgttaaatgagaaaactgttaattatgaagaacaatatgaagtttta
gagaatattaacgggaaagaactggatattggccgtttgcaagctctaaatggtgctcaa
tatggtgagttgcagctaaaggttgcaggtcctgctgtcaatcattaccctttgtttgaa
agtatccaatctgtctcaccatttgatgtaaacaataaactccgtgaatcaaactctctt
ttatctgttcaaacatcagaacagttctggtctgatgagctgcccaagactgggagcaga
gccaatgaatatcagctggatagaggaatccctccagaggaattgagtctgtattatcag
gatcctcaaggggagatacaaggaccttttcttggggtggacatcatttcatggtttgag
caagggttttttggggccgacttacctgttcgtttggaagatgcacctgatgactcaccc
ttccttgaattgggagatgttatgcctcaattgaaatttggacatgagtatggtagtgga
aatgaattgagttccaatttagaaaagtcagttgtaatggagggtgcgtctgaaacatgc
ttacaagctggtgctccagttcctgaatctgtttcttccactgtagtggatggatccaga
tggcagttacatgagtttgataatatcccttcacatcaaggtcagtcaaatttacctgac
agtcatcgtcatctgccacaacacatgcactctcagggaaaagatttcaatgattttggt
gtccaagatgaagaaatcgtgtttcctggaagacctggtagtggtggcggtgctatagga
aagatgtcgagagtttatggggaatctgccacaaatagtgggaaccagttgcatctccct
catgaaatgacagagtctggtttgtcaaatcagaatgacaataaaatgaatccttttaga
tggtctgagcttgccagtacacacacaaggagtgaacaggcacctccattcagtggaggc
gtacaggagaaacttgtaaatgcaggacctggtggtagactttcccctttcagtgccatg
gctactcaggctcacgcccctgaggcatggaatgatgcttttggcagcagctcacattcg
tatcaagatgtcatggatggtcgcctatcttccagaatggaccaagaatttagccaattt
gatatagcagagaagctattgcagcagcaacttcagcaacagcatctccagcagcatggt
gtggtgccttcacttaatacgcgcatgagtgatgcaatgctagaaggggccccatctact
aagttgatgcaccacaaacagcttggtaatcaaatggggcaagatatggaacatctatta
gcccttcagcggcagcagcagaggcagatccaacttcaacaacagcagcagctgcagcaa
caagagcagttccatcagcagcaaatgttgttgaaagagcaacagcagtctcaggcaaga
caggctcttcttgagcagttgctacagagtcaaatgcgtgagtcaggtcgtgggcagtct
cgtgctgctcttgaacaggctttattgaagcagcaaattctgaatgataggcaacaacgc
tcccaatttccttctaggcattctgatccatcccttgagcagctaattcaagcaaaattt
ggtcaagtgcctcatcaagggcatcaaaatgatttagtggatcttttgtcacgtggaagg
catgggcaaattcaccccctggatcaacagatcattcagcaagatcagctgcatgggagg
cagttgcctttggggctaaggcagcgattggaaatggaagaaaggccaatcaaaactggg
tggtcgcttgatgatgttggtaattttcacagaaatccctctgcttcgaatagagctatc
actgctggatttggtccattggacttttattcccaacaaattccacctccggaggagcat
ctcaaccttcttgaacgcaacctttctgtacatgacagactccaacatggtctttatgag
cctggcatgttaccttttgagcgttcaatgtcattgcctgtcggtcctgctggggtaaat
cgcgatgttgtgaattcattggctcgtggcctagaaatgcaggagcagattgcacggatt
caatctagtggtcaaggcggaggattctcgtctggcatgttttctcagcatataaaccac
cctttacattccaatcaatttcatgattcacgaatggatacaacagagggccattggtct
gatagtaatggtcatttaccaaatgattggatggagtctagagttcaacaacaccttcat
aatgaaaggcagaggagagagatagatgccaaaagaaatactgaagaccctagtttgtgg
atgtcagctggatcaaacgaagacagttctaagcgattgcttatggaactactacagcag
aaaactggtcacgcttcaagtgaccacgctgatatgattaatggagtaccaaatgagaga
aggccaccttcaggtcatcgccataggagcatgtcaaaccagtcattcggtgctctttca
gaccaggaatctggtttcaacaactcattcactgttgggtcctttaattctgattcaggt
ttgccaccacagaatcgaccatctgagggaataagcagtatcctggaaattgatggattg
ccttatcgatcaaaaggtggaggaatgattgctgctgctgttgatgagggcataatttct
gatgctcaagaaggcttaattgagcaggctggcttaacttctaatgacagaggggaaagg
gaaatgccagtcaatgtcctaagcaggaataagtcacttggctctgctggttttcagaat
atcaaaattggatcagatgattctgttcctgaggacgctgctaaggataggttgagatcg
tccagttctaaaggaccagagaatgtcttgctgagacgtccgcctgcagcacgagctgca
tcttctcaggaagcgctgtcagagctgaatgttgactcagtcagagggaaaagtgtttca
agtacagtaactcctgatggagtgagaagggaggtgggtgttatagctgtaggaaatgta
gaagcggctagcagaagagatgtacagttccgaagaacatcatcctgtaatgatgccgat
gtattggaaacatcattcagtgatatgcttaaaagcagcgctaagaagccaacaccgcaa
gaaactcatgcttcagcagcagcttcagaggcgctagatggagcttctggggctcggaac
aaaaagaagggcaagaaaggcagacagattgatcctgcacttcttggtttcaaggtcact
agcaatcggatcatgatgggcgaaattcagcacgttgaagattaa
DBGET
integrated database retrieval system
