Salvia splendens (scarlet sage): 121802009
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Entry
121802009 CDS
T07627
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121802009
Spliceosome [BR:
sspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121802009
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
Motif
Other DBs
NCBI-GeneID:
121802009
NCBI-ProteinID:
XP_042057458
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All DBs
Position
5:complement(42988567..42994215)
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AA seq
426 aa
AA seq
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MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELVELGKPFGKVVNTKCNVGANRNQAFI
EFAELNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGN
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDSETATAAKDALDGRSIPSYL
IPELGPCSLRITYSAHTDLSVKFQSHRSRDYTNPMLPVAPSAIDASGQFSVGVDGKKMEP
ESNVLLASIENMQYAVTLDVLQTVFSSFGPVLKIAMFDKNGGLQALIQYPDVQTAVVAKE
ALEGHCIYDGGYCKLHLSYSRHTDLSIKVNNDRSRDFTIPNTPVLNSQPSVLGQQPYAGG
PGGPSYNGTQYAPGPDPHATGWNPAMPQQMHNYPYGGPPPMGQGAVPPHLQNGQPHSSPM
HPYHHQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagtttccagtcaaccgcagtttcggtacacccaacctccgtccaaggttctc
catttaaggaacttgccatgggaatgtaccgaagaggaattagtcgagctggggaagcca
tttgggaaggttgtcaacacaaagtgtaatgttggagcaaataggaaccaagcttttatt
gagtttgcggaacttaatcaagctattgctatgatatcgtattacgcatcatcatctgag
cctgctcaggtacgagggaaaaccgtctacctacaatattcaaacaggcaagaaatagtg
aacaacaagactactgcagatgttgctggaaatgtactcttggtaacaattgagggaaat
gatgcgcgtcttgtcagtattgatgtgctacacttggtattttcagccttcgggtttgtt
cataaaattactacttttgagaagactgctgggtttcaggctctggtgcaattttcagat
tcagagactgcgactgctgccaaggatgcccttgatgggagaagcattccaagttatttg
attccagagctggggccgtgttctcttagaataacatattctgcgcatacagacttgagt
gtaaaattccagagccatcgtagtagggactacaccaatcctatgctccctgttgctccg
tcagctatagacgcaagtggtcagtttagtgtaggagttgatgggaaaaaaatggagcct
gagagcaacgttctacttgcttccatcgagaacatgcaatatgcagttaccttagatgtc
ttacaaacggtcttttcatcatttgggcctgtcctaaaaattgccatgttcgacaaaaat
ggtggtcttcaagcattgatccagtatccagatgtccagaccgctgtcgttgcaaaggag
gctttagaaggacattgcatatacgacggaggatactgcaagcttcacctctcatattct
cgccacactgatcttagtataaaggttaataatgatagaagcagagacttcaccatccca
aatactccagtcctaaactctcaaccctcagttttaggacaacaaccatatgccggaggc
ccaggcggtccttcttacaacggaacacaatatgctccaggtcctgatcctcatgcaacg
ggctggaacccagcgatgcctcagcaaatgcacaactacccttatggaggccccccacca
atgggtcaaggggcagtaccacctcacctccaaaacgggcaaccacactcgtctccgatg
cacccctatcatcatcaatag
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