Salvia splendens (scarlet sage): 121802153
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Entry
121802153 CDS
T07627
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121802153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121802153
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121802153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_14
AAA_lid_3
AAA_22
AAA_16
RuvB_N
AAA_2
Rad17
RNA_helicase
AAA_5
ATPase_2
ABC_tran
AAA_18
AAA_28
AAA_33
TsaE
DUF815
IstB_IS21
AAA_25
PduV-EutP
CPT
AAA_24
nSTAND_NTPase5
RsgA_GTPase
DUF3931
Motif
Other DBs
NCBI-GeneID:
121802153
NCBI-ProteinID:
XP_042057671
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Position
5:17311622..17316145
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AA seq
715 aa
AA seq
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MSRDRGSAAEALLPCEEVALRGHIKSVSIGKKTLTDDHIVSSLRLLFPDTYSCLDRNLLT
ERVAKITQIQSRREDSIAEEPAPSSTKRQKINEVTGSSSENGDCNSNPKLIGDLGRRDEL
GDGRREMDRSESEKRIRPMFRDFSGISSVIQELEREVVWPLHQLKLLRHLGVEPTSRILL
HGPRKCGKTTLARAVANEARLPLFEVSVAQLLHGDLGAVEEMIGSLFYAAYMRAPSVVFI
DEIDAMTSAKISSLKKVEYRIVYQLMAFMDGRYRPTGPVNHDVSSESCNSAPGYVLVIGA
TNKPGALDTSLRRLFDCEFALGVPDEYERCDILTDLTSNLKVEVGFDPRKLARSTMGYVA
GDLVALAKRAGIVAVDWIINKRTLEYYKNSRPKAQFEECYKLPFYDAELENLSITMEHFV
EAGKMVQPSAILKEFFTPLYAKWDDVGGLQALKLEFERRVVKLLKYGHVYEDLKTYALSS
FFLCGPSGCGKTLLVKAVAKEAGASFMHIRARDLMKFGDQCEMVVHNIFSYASTHVPCVL
FFDELDVVASCDDVPQWPDFRQLISELSDTEIMMESVLVFGATNRPEIVNHSEFIETQFD
RILYVPLPTPEERGAILKALARYKPIDADVDLMALGNNVACQNFSGRDLFALMTEASKFA
IDRPALSVGSCMTIKDADFKSALAKVSPSLSAAEVKNWEVQSKKIDVHSSSVMDW
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggacagaggcagcgccgctgaagctctcctgccgtgcgaagaagtcgctctc
cgcggccacatcaagtccgtctccatcggcaaaaaaaccctcaccgacgaccacatagta
agctcactccgcttgttattcccggacacctactcctgcctcgatcgcaacctcctaacc
gaacgcgtcgccaaaatcacccagatccagtctaggagagaagactccattgccgaagag
cctgctccgtcctcaacgaaacggcaaaaaataaatgaggtaaccggcagttcatcggaa
aatggcgattgcaatagtaatccgaaattgattggggatttagggcggcgtgatgaatta
ggcgatggcaggagagagatggacaggagtgagagtgagaaacgtattcggccaatgttt
agggatttctcaggaattagtagtgtgattcaagaattggagcgggaagtggtttggcca
ctgcatcagttgaagctgctacgccacctcggagtcgagcctacgtcccgaattctgctg
cacgggccgcggaagtgtgggaagacgacattggcccgagccgttgccaatgaggccaga
ctgccattgttcgaagtctctgttgctcaattgttgcatggagatttaggtgcagtagaa
gaaatgatcggaagtttgttctacgcagcatacatgagggcaccatctgttgtgttcatt
gatgaaatcgatgcaatgacttcagcaaagataagttcactgaagaaagtagagtatcgt
atagtgtatcagttgatggctttcatggacgggcgatacagacctaccggacctgtaaat
catgatgttagttctgaaagttgtaatagtgcacctggctatgtgctggtgattggagca
accaataagcctggtgctcttgacacttccttaaggcgtctgtttgattgcgaatttgct
ttaggtgtcccagatgaatatgaacggtgtgacattctgacagatctaacgagtaatctt
aaggttgaagttggttttgatcccaggaaattagcaaggtccactatgggttatgtagca
ggagatttggttgctctagcaaaaagggctggtatagttgctgtagattggatcattaac
aagagaacattagagtattataaaaactcgaggcccaaggctcaatttgaagaatgttac
aaactgccattttacgatgcagaattggagaacctcagcataaccatggaacactttgtg
gaagccggtaagatggttcagccatctgctattttgaaagaatttttcaccccactatat
gcaaagtgggatgatgttgggggccttcaagcattgaaattggagtttgaacgccgtgta
gttaaactgttaaagtatggtcatgtttatgaggatctaaagacgtatgcccttagctcc
tttttcctttgcggtccttctggctgtggaaagacattgcttgtcaaggctgtggctaaa
gaagcaggagcaagtttcatgcatatcagggcccgggatctgatgaaattcggcgatcag
tgcgagatggtggtgcacaacatattcagttatgcaagcactcacgtcccatgtgtactt
ttcttcgatgagttggacgtagtggcctcatgtgacgatgtgccacaatggccggacttt
agacagctaatatcagagctgagtgatacagaaataatgatggaaagtgttcttgtgttt
ggtgcaacaaacaggcctgaaatcgtgaatcattctgaattcattgaaacacagtttgat
aggatcctgtatgttcctctccctactccagaagagcgaggtgcaatattgaaagctctt
gctcgatacaagccaatagatgccgatgtggacctgatggccctaggaaacaacgtggct
tgccaaaattttagtggccgtgatctatttgctttgatgacagaagcttctaagttcgcc
attgatcgaccagcattgtctgttgggagttgcatgacaatcaaagatgcagatttcaag
agcgcgttggcgaaagtctccccttctctctcagccgcggaagtcaagaactgggaggtc
cagtccaagaagattgatgttcatagcagttctgtgatggactggtag
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