Salvia splendens (scarlet sage): 121802238
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Entry
121802238 CDS
T07627
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121802238
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121802238
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
121802238
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_Vps41
zf-RING_UBOX
Prok-RING_1
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
121802238
NCBI-ProteinID:
XP_042057793
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All DBs
Position
5:5754557..5756083
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AA seq
345 aa
AA seq
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MSAPPPPTAISLIKQMPQLPPPYTDTSSPSSSASTSSDAVSSSSIVIVIIIIASAVIISA
SIYLLLRLLSKRIHRTFSAADDVVLRRDSSNRNPSQPQFHAAPHHSLLESLPLFTFRSVT
GNLTGGDCAVCLSKFEPHDQLRLLPICCHAFHADCIDAWIVSNQTCPLCRSPVTASDSEL
LDKILPNPNRGSFRDGNGNSGSFRIEIGSISRRRGGGAPEAAEGDRRSYSIGSFDYIVDD
NGYEVSAGSVTHRRGASDCTSADKESSVGIPIPDPPGEALAADVSSGRNWLRDYVDRLES
VSFRSSGRFFSGSSRRSDPVAAVGDLEANRVGEEISELFRWLSGI
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccccgccgccgcccacagccatctccctcatcaagcaaatgccacaactcccg
ccgccatacaccgacacgtcatctccgtcgtcgtcggcttccacctcgtccgacgccgtc
tcatcgtcttccatagtgatagtgataataatcatcgcctccgccgtcatcatctccgcc
tcaatttacctcctcctccggctactctcgaagcgcatccatcgcaccttctccgccgct
gacgacgtcgtcctgcgccgcgactcctccaaccgcaaccctagccagccgcaattccac
gccgcgccgcaccactccttgctcgaatccctcccgctcttcactttccgctcggtcacc
ggaaacctcaccggcggcgactgcgctgtgtgcctctccaagttcgagccgcacgatcag
ctccgcctgctgcctatctgctgccacgcgttccacgccgactgcatcgacgcctggatc
gtctccaatcagacgtgcccgctctgccgctcgccagtaaccgcttccgactccgaattg
ctcgacaaaatcctccccaatccgaaccgcggcagttttcgggacggaaacggaaacagc
ggcagtttccggattgagatcggaagcatcagccggcgccgcggcggaggcgctcccgag
gcggcggaaggagatcggcgctcgtattcaatcggctccttcgattacatcgtggatgat
aacggctacgaggtctcggcaggatccgtcactcatcgcagaggagcttccgattgcaca
tcggcggacaaggaatcgtcagtcggaattccaataccggatccgccgggggaagcgctc
gcggcggacgtatccagcggtagaaactggctgagggattacgtcgacagattggagtca
gtgtcgttcagaagctcggggagattcttctccggcagcagcaggcggagcgatcctgtt
gccgccgtcggagatctggaggcgaaccgcgtcggagaggagatcagtgagctgtttcgg
tggctttccgggatatga
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