Salvia splendens (scarlet sage): 121802477
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Entry
121802477 CDS
T07627
Name
(RefSeq) BUD13 homolog
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121802477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121802477
Spliceosome [BR:
sspl03041
]
Complex B
Other components
RES complex
121802477
Complex C
121802477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bud13
Motif
Other DBs
NCBI-GeneID:
121802477
NCBI-ProteinID:
XP_042058089
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All DBs
Position
5:complement(38348037..38351864)
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AA seq
481 aa
AA seq
DB search
MVGASSDPNSLKEYLKKYTSNDDKDKKKKKKRKAKPNAAGVIVVDEDPVWQKPVNIEDEE
DSADEEKPLVDEDIDVKRMRRLEQVMSKRPFGVISEDGSGWVPLSTNPSLTKSENQGSDI
SPPRKRIPRNDTPSPEPAERADADSSPPRKSRRVSGERTARHDTPSPEQHGEDTDLSPPR
RQQSDKHASSPEPGRSLHHKAANDSDISPPRRARPDSRHQDRDLSPPRRQQRDKQSSLVE
PGGISPPRRATSVSDLSPPRRKPKESDNPRAGLFSGKDIRKQIDKEKKDSWLSFKKMDPS
VSGRDAEAIYRDKTGKRMSKEEYLKSQKKEEKPKEIKLEWGKGLAQKREAEARLQEMEAE
KDKPFARSRDDPDFDAMLKDRVRWGDPMAHLAKKKQLDALLPNLGDSERMKESGFIIPQE
VPTHSWIRRGIDAAPNRYGIKPGRHWDGVDRSTGYEKELFKRTNDKRATEAEAYLWSVAD
M
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggttggtgcatcctcagatccaaattcacttaaagagtaccttaagaaatacacaagt
aatgatgataaggataagaagaaaaagaagaagagaaaagcaaagcccaatgctgctggt
gtcatagtggtggatgaagatcctgtgtggcaaaagcctgttaacattgaagatgaagaa
gattcagcagatgaagagaagcctctagttgacgaagatattgatgtaaaacgcatgaga
agactggagcaggtgatgtccaaacgcccttttggagtcatttctgaggatggaagtggc
tgggttcccttatccactaatcccagtctaacaaagtctgaaaaccaaggttctgatatc
tccccacctcggaaaaggattcctcggaatgatactccatcaccagaacctgcagaacga
gcagatgcagactcttcccctccacggaagtcacgtcgtgtttcaggtgagaggactgct
cggcatgataccccttcacctgagcaacatggtgaagacacggatttgtcccctcctagg
cgacagcaaagtgataagcatgcatcttcaccagaacctggaagatccttgcaccataag
gcggccaatgattcagatatatctcctcctagacgtgctcgtccggactctaggcatcaa
gacagagatttgtccccgcctcgacgacaacaaagagataagcaatcatcattggttgaa
cctggtggaatatctcctcctagacgtgctacatcagtttctgacctttctcctccaagg
aggaagccaaaggaatcagataatccgagagctggtttattttccggtaaagatatcaga
aaacaaatcgataaagagaagaaggacagttggttaagctttaaaaagatggatccttca
gtaagcggccgagatgcagaagcaatataccgcgacaaaactgggaaacgcatgtcaaag
gaggaatatctgaaatcccagaagaaagaagagaaaccaaaggaaataaaactagaatgg
ggcaaaggtttggcacagaagagggaggctgaagctagacttcaagaaatggaagcggag
aaggataaaccctttgctcggagcagggatgaccctgattttgatgcaatgctcaaggat
agagttcgatggggtgatcccatggcacatttggcgaagaaaaagcagttggatgcactc
cttccgaacctaggtgatagtgagaggatgaaagaatctggattcataataccccaggag
gtcccaactcatagctggataagaagaggaatcgatgcagcccctaaccgctatgggatc
aagcctggccgacactgggatggtgtggaccgcagcacggggtatgagaaagagctgttt
aaaagaacaaacgacaaacgggctactgaggcagaggcatatctatggtctgttgcagac
atgtag
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