Salvia splendens (scarlet sage): 121802646
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Entry
121802646 CDS
T07627
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03420
Nucleotide excision repair
sspl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121802646
09124 Replication and repair
03420 Nucleotide excision repair
121802646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sspl03051
]
121802646
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121802646
Proteasome [BR:
sspl03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
121802646
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
121802646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
CUE
UBA_3
Dsc3_N
MmeI_C
BLTP1_C
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
121802646
NCBI-ProteinID:
XP_042058259
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Position
5:complement(19496695..19500759)
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AA seq
374 aa
AA seq
DB search
MKLTVKTLKGSHFQISVHATDTIMAVKKCIEDVQGKDNYPCGQQLLIYNGKVLKDESTLA
DNKVSEDGFLVVMLSKSKSLSSSASTSSQPASTAAPASKIAAATSNPAPPASIPAPAAEA
RASVPAPKSTGPASVAPLANDQSGSYDEAASSLVASDNLDQTIQQLIDMGGGSWDKETVR
RALRAAYNNAERAVDYLYSGIPETAEVDVPLAQPLVDSMVGTGSPALGGPNSSPLNLFPQ
ETISGAGSLGFLRNNQQFQALRSLVQANPQILQPMLQELGKQNPSLLRLIQENHQEFLQL
INEPVDGSEGDIFDQAEQDMPHAVSVTPAEQEAIERMEAMGFDRALVIEAFLACDRNEEL
ALNYLLENAGDFED
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccgtcaaaactctcaaaggcagccacttccaaattagcgtccatgccacc
gataccataatggctgttaagaaatgcattgaagatgtgcaaggcaaagataattatcca
tgtggtcagcagttattgatttataatgggaaagttttgaaagatgaaagtaccttagct
gataacaaggtctccgaagatggctttcttgttgtcatgctaagcaagagcaaaagcttg
agctcaagtgcatcaacatcttctcagcctgcttctactgctgcaccagctagtaaaata
gctgcagcgactagtaatccagctccaccggctagtattcctgctcctgcggctgaagct
cgagcatctgtaccggctcctaagagtaccggaccagcttctgttgctccattagcgaac
gaccaatctggatcatatgacgaagctgcttccagtttagttgcttccgataatcttgac
cagactattcagcaactgattgatatgggtggtggtagttgggacaaagagacagtgaga
cgtgctcttcgagctgcatacaataatgcagaacgagccgttgactacttgtattcagga
atccctgagaccgcagaagtggatgtaccattggctcaacctctcgttgattccatggtt
ggaactggttcaccagctttaggaggaccgaactcatcccctttgaatttgtttcctcag
gagactatttctggtgctggatccctcggtttcctcaggaacaaccaacagtttcaagcc
ctgcgttcgctggttcaagctaatccgcaaattctgcagcccatgcttcaggagcttgga
aagcaaaatccttcactcctgagacttatacaagaaaaccatcaggagttcctccaatta
attaacgaacctgttgatggttctgaaggggatatctttgatcaggctgagcaggacatg
ccccacgctgtcagtgtcacacctgcagaacaggaggcaattgaaagaatggaagcaatg
ggatttgatagagctcttgtgatcgaggcatttttagcttgcgatcgcaatgaagaacta
gcactgaactacttgctggaaaacgctggagattttgaagattga
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integrated database retrieval system
