Salvia splendens (scarlet sage): 121804367
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Entry
121804367 CDS
T07627
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial-like isoform X1
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121804367
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121804367
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
121804367
DNA replication proteins [BR:
sspl03032
]
Prokaryotic type
DNA Topoisomerases
121804367
DNA repair and recombination proteins [BR:
sspl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
121804367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
MTBP_mid
Integrase_Zn
Motif
Other DBs
NCBI-GeneID:
121804367
NCBI-ProteinID:
XP_042059795
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All DBs
Position
5:4585232..4605629
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AA seq
950 aa
AA seq
DB search
MNPSCIRPGTHFGPPNEPAAAPMAFAAGLRLLRSHPLSFSSAAPPRLLLARRASEHRLLS
AVSPHQRRRLFAAKASSRRREDELDENGSVVALKDGGGGGEGGDGRIVVTELHKEATEAY
ISYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLASKKPHKKCARVVGEVLGKFHPHG
DTAVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALSESMLLADLEQ
DTVDFVPNFDNSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSVLIHN
PDATLQELLEYMPGPDFPTGGIIMGNIGILDAYRTGRGRVVIRGKTDVELLDPKSKRSAI
IIKEIPYQTNKASLVEKIAELVENKSLEGISDIRDESDRSGMRIVIELKRGSDPSIVLNN
LYRLTALQSAFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLTQAQDRYHI
VEGIITGLDNLDSIIDIIRKASNHASASTNLRKEFNLTDKQAEAILDISLRKLTSLEKNK
FIDEGRSLSGQISKLQELLSSKKLILEMIEVEANEIKNKFSTPRRSMLEDSDSGQLEDID
IIPNEEMLLALSEKGYLKRMKPDTFTLQHRGTIGKSVGKLRVNDAMSDFLVCRAHDHVLY
FSDKGTVYCARAYKIPECSRTAAGTPLVQILSLSDGERVTSIIPVSEFEGDQYLVMLTIK
GYIKKISLNYFSSIRSTGIIAIQLVPGDELKWVRHCSNDDYVAMASQNGMVILCPCENMR
ALGRNTRGSVAMRLKQGDKMASIDIIPASLGKKIEKGSETLPSHGKRFSGPWLLFISERG
FGKRVPVASFKTSSLNRVGLIGYKFSTEDRLAAVFVVGFSVGEDGESDEQVVLVSQSGTV
NRIKVRDISIQSRYARGVILMRLEHAGKIQSTSLISATESEEELEEEAAA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgagttgcatccgacccggaacccatttcggaccccccaacgaacccgccgca
gcacccatggccttcgccgccggactccgcttgctccgctctcacccactctccttctcc
tccgccgccccccctcgcctgcttctcgctcgccgcgcctccgagcaccgccttctctcc
gccgtgagcccccatcagcgccggaggttgttcgccgcgaaggcctcctcgaggcggagg
gaggatgaattggacgagaacgggagtgtggttgccttgaaggacggcggtggtggtggt
gaaggaggcgatggtaggatagtggttacggagctgcacaaggaggcaacggaggcgtac
atatcgtatgccatgtctgtgctgctaggccgggcactgcccgatgttagagacggcctc
aagcctgtacaccggagaattttatatgccatgcacgagttgggcttagcgtcaaagaaa
ccccacaagaagtgtgccagagtagttggtgaggttctaggaaagttccatccacatgga
gatactgctgtctatgattcattggttcgaatggctcaggatttctccttgcgctctcca
ctgattcgtgggcatgggaattttggctctattgatgcggatcctcctgcagcaatgcgt
tacactgagtgcaggctggaggcactctcggagtccatgttattggcagatttagagcaa
gacacggttgattttgttccaaactttgataattcacaaaaagaaccatctctgcttcct
gctcgcatccccaacttgctactgaatggtgcttcagggattgcggttggaatggctacc
aatattccaccacataatcttggggagttagtagatgcactttcggtgctgattcacaat
ccagatgcaacgttgcaagaattgcttgagtacatgcctggacctgacttcccaactgga
ggaataataatgggcaatattggtattttggatgcatatcgaactggacgagggcgagtg
gtgatcagagggaagactgatgttgagttgctggatcccaagagcaagcggtcagcaatt
ataataaaagagattccgtaccagaccaacaaagcttctcttgttgagaaaattgctgaa
cttgtagaaaataagagtttggagggaataagtgacatacgtgatgagagtgatcgatct
ggaatgcgcattgttattgagctcaagagaggatcagatccctccattgtattgaataat
ctatatcgtcttacagctttgcagtcagcatttagctgcaacatggtggggatccttaat
ggccaaccaaagctaatggggttgaaagaattgcttcaggcatttttagattttagatgt
tctgtggttgaaaggcgtgcaaaatataaactaactcaagctcaagatcggtatcacatt
gtagagggtatcataacaggacttgataatctggacagtatcattgacataatcaggaaa
gcttctaatcatgcatcggcgtctactaatcttagaaaagagttcaacttgactgacaaa
caagctgaagctatattggatataagcctcagaaagctaacgtcactcgagaaaaacaag
tttattgatgaagggagatctttgtctggacaaatttcaaaactgcaggagcttctttca
agcaaaaagttaatactggagatgatagaagtggaagcaaatgagataaagaacaaattt
tctactcctaggcgttcaatgctggaggactctgatagcggccagcttgaggatatcgat
attatacccaacgaagaaatgctactggcacttagtgaaaaaggctacctaaaaaggatg
aagcctgatacattcactctccaacaccgcggtactattggaaaatcagtagggaaatta
agagtgaatgatgctatgtctgatttccttgtatgccgtgcacacgatcatgtcctttac
ttcagtgataagggaacagtatattgtgctcgtgcctataaaattcctgaatgcagcagg
actgccgctggcacacctttagtccaaatcttatccctatccgatggtgagagggtaact
tcaatcattcctgtcagtgaatttgaaggagatcaatatcttgtgatgctcactattaag
ggatatatcaagaaaatttctttgaactatttctcatcgataaggtctactggaatcata
gcaattcaactggttccaggtgatgagctgaaatgggtgaggcattgctcgaatgatgat
tatgtggccatggcatcacagaatggaatggtgattttgtgcccttgtgagaatatgaga
gcacttgggaggaatactagaggttcagttgcaatgagactgaagcaaggggataagatg
gcgagcattgatataatacctgcatccttgggaaagaagatcgagaaaggctctgaaaca
ctgcccagccatgggaagagattttctggcccttggctgctgtttatatctgaaaggggc
tttggaaaacgagttcctgttgctagcttcaagacgtcatcactgaatagggttggtctt
ataggttacaagttttcgacagaagatcgtctagcggctgtatttgtagtaggattttca
gtaggggaggatggagaaagtgatgaacaagtcgtgcttgtcagccaaagtggaacagtg
aaccggatcaaagtacgagatatctccattcagtctcgctatgcaagaggggtgattctg
atgcgccttgaacatgctggaaaaatccagtcgacttctttgatatcagcaactgaatca
gaggaggaactagaggaggaggctgcagcatga
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