Salvia splendens (scarlet sage): 121804373
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Entry
121804373 CDS
T07627
Name
(RefSeq) multisubstrate pseudouridine synthase 7-like
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspl03016
]
121804373
Enzymes [BR:
sspl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
121804373
Transfer RNA biogenesis [BR:
sspl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121804373
Prokaryotic type
121804373
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Effector_1
DUF7494
Motif
Other DBs
NCBI-GeneID:
121804373
NCBI-ProteinID:
XP_042059815
LinkDB
All DBs
Position
5:complement(4773196..4783711)
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AA seq
710 aa
AA seq
DB search
MLRSQIAKSLKNIKPFLKISSSLKPYSHRPEMSMNSVEESQVGILCYISQLPGFRGILKQ
RYSDFIVNEVGLDGNVVHLTTLDSPLEIAVEKKVEVADLQDRDYTNEIESFRVLAGDSDV
EKLKKLIDQVVSGVINDDESIVLCPISDKSHRTAVHNFFKERMKFLVTDTVDGPDSSSKC
IRVRMNSGSNNGRGRNSRKRKNRDDKPYDSRGSDSSWPENLGKFLRFHLYKENKDTQEAL
GLLAKMLGTKPRSFGFSGTKDKRAVTTQRVTIFKQRASKLAALNEKLIGIKVGNFCHVNE
GLVLGQLQGNRFTVTLRRISAENEDIIRAAATSLGENGFINYFGLQRFGSSSIATHLIGA
ALLRGEWKAAVSMVLEPREGEKDATRQIREYYKESGDIEGTLRQLPRYLVAERAILQCFQ
KCPGNYLQALLAIPRTLRMMFVHSYQSYLWNHAASMRVQNYGFKQVVLGDLVYCKEEDND
KETLTSPLECEDEAGDDDTHIDCNLEDIPVADLSEVKNASVKVISEEDIAAEKYSIEDIV
LPLPGSRVSYPSNEIGKIYNDLAKKDGISLTESAHNSKEFSLTNMTGAYRRVFQKPKDFE
WELLKYTDPNLPLAETDMDVIAKSRASRIVRDSDEKENPHGCRPEAENCNNETNISANVK
DDTQTETSESQESQTALKLGFTLPASCYATMAIRELLKTSTSVAFHRALN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggagtcaaattgcaaaatcactgaaaaacattaaaccctttctgaaaatctcc
tcttctctaaaaccctactcccaccggccggagatgagcatgaattccgtcgaagaatct
caagttgggattctctgctacatttctcaacttcccggcttccgaggaattctcaagcag
agatattcagattttattgtaaatgaagtgggtttggatggaaatgttgttcatttaact
acactggactctccgttggagattgcagtggaaaagaaagtagaagtagctgatttacag
gatagagattataccaatgagatagaatcgttcagagttcttgctggtgattctgatgtt
gagaaactgaaaaaactcattgatcaagttgtttcaggagtaattaatgatgatgaatct
attgttctttgtccgatctctgacaaatctcatcgaactgctgttcataacttcttcaag
gagagaatgaaattccttgttactgacacagtggatgggcctgattcttcatcgaagtgt
attcgtgtgcgaatgaattcaggaagtaataatggcaggggaaggaactccaggaaaaga
aaaaatcgagatgataaaccatatgattctagaggctctgatagtagttggccagaaaac
cttggcaagtttcttaggtttcatctttacaaggagaacaaggatacacaagaagccctt
gggctccttgctaagatgcttggcactaagcccaggtcctttggtttttctggcacaaag
gataaacgtgcagtaaccactcagagggttaccattttcaagcagcgggcaagtaagtta
gctgcacttaatgagaaattgattggtattaaagttggaaacttctgccatgttaatgaa
ggacttgttctcgggcaactccaaggaaatagatttacagttacattaagaagaatcagt
gctgagaatgaagatattattagagcagctgctacttctttaggggagaatggatttatc
aactattttggtttgcagcgctttggaagcagttctatagcaacacatctcattggagcc
gcattactgcgaggggaatggaaagctgctgtaagcatggttttggagccgcgagaagga
gagaaggatgccacaagacagataagagaatattacaaggagagtggtgacattgagggt
actttaaggcagttaccacgatatcttgttgcagaacgtgctattctgcaatgcttccaa
aagtgtcctgggaattacttacaagctttgttggcaatacctaggacattgagaatgatg
tttgtgcatagttatcagagctatttatggaaccatgcagctagtatgagagttcaaaac
tatgggttcaagcaggttgtattgggtgatttagtatactgcaaagaagaagataatgac
aaagaaacattaacatctcctttggagtgtgaagatgaagctggcgatgatgatacacac
attgattgcaatcttgaggacataccagtggctgatctttctgaagtaaaaaatgcatct
gttaaggttataagtgaggaggatattgctgctgagaagtattctattgaagatattgtc
cttcctttaccagggtcaagggtgtcttatccatcaaatgaaattggaaaaatctataat
gacttggcaaaaaaggatggtatcagcttgacggagagtgcacataattcaaaggaattt
tcattaaccaatatgactggagcatataggcgggtgtttcaaaagcccaaggattttgag
tgggaattgctcaaatacacagatccaaatttaccactggcagagacagatatggacgtt
attgccaagtcacgtgcatccaggattgtcagagattcggatgaaaaggaaaatcctcat
ggttgcagaccagaggcagaaaattgcaacaatgagaccaatatatcagcaaatgtaaaa
gatgatacacaaactgagacctctgagtcacaggaaagccagactgccctcaagttgggg
tttaccctcccagcttcatgttatgcaactatggccataagggagctgctgaagacatca
acctcggttgcatttcacagggcgctgaactaa
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