Salvia splendens (scarlet sage): 121804380
Help
Entry
121804380 CDS
T07627
Name
(RefSeq) protein TSS-like isoform X1
KO
K03255
protein TIF31
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sspl03012
]
121804380
Translation factors [BR:
sspl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121804380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_9
TPR_MalT
TPR_8
TPR_16
TPR_1
Motif
Other DBs
NCBI-GeneID:
121804380
NCBI-ProteinID:
XP_042059822
LinkDB
All DBs
Position
5:complement(4925566..4938268)
Genome browser
AA seq
1901 aa
AA seq
DB search
MVHFFSLLFKLYIFLPKYNLLQLYTAGLEMAPKSGRGKTKGDKKKKEEKVLPVVVDIKVN
LPDETHVILKGISTDRIIDVRRLLSVNTVTSNITNYSLSHEVRGPRLQDAVDVSALKPCT
LTLVEEDYDEDSATAHVRRLLDIVACTTSFGPSPEKVASPTAASANSKGREEGKDGRGTQ
DGKVSKKAGKSPRAKNKKDSSPPPLPAESDPKDGSAAAIDREGEMSNTSPKLGSFYEFFS
LSHLTPPLQFIKRVERKSIDDLSGDDDNLFFLEVKLCNGKLIFIEASRKGFYGTGKQQIF
CHNLVDLLRQLSRAFDNAYDELMKAFSERNKFGNLPFGFRANTWLIPPVAAQSPSTFLPL
PTEDEKWGGNGGGLGRDGKSDLLPYANELLFLASMPCKTAEERQIRDRKAFLLHSLFVDV
AIFRAIASMKHVVQTPEYSNYSSKSQIIYTEKVGDLSITVMKDASNASCKIDTKIDGEQA
IGLDDKKLVERNLLKGITADENTAANDIATLGVVNVRHCGYIACVKVQGMDNASANTPLR
SQLLLEQPDGGANALNIDSLRVLLHENATTEQNKASAHSQTLESEQLEYSQAFVERLLQD
SLGELCEEKRDLDAFVRWELGTCWIQHLQDQKKTEKEKKLSNEKAKNEMKVEGLGTPLKS
LKSRKKTLDGSAVDQQNEIVKSAADDVKDDAEKTLNVTESQIDNGAIENEIMLKSLLSDA
AFSRLKESETGLHAKSLQELIELSQKYYDDVALPKLVADFGSLELSPVDGRTLTDFMHTR
GLRMRSLGQVVKLSEKLSHVQSLCIHEMIVRAFKHILQAVISAVEKPEKMAAAIAAALNL
MLGVPESKQPDQPSGVNSLVWNWLDVFLMKRYEWNIKNFKYEDIRKFAILRGLCHKVGIE
LVPRDFDMKSAHPFQKEDIVSLVPVHKQAACSSADGRQLLESSKTALDKGKLEEAVSYGT
KALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQAAIYQQKALDINERELGLDHPDTM
KSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHV
ALRYLHKALKCNQKLLGPDHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGP
DDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYINPSQDAKG
KEAMGSKRRNHIAKAKEKVIHDNLATSDTEVPPKVSFTTEAKEDEQVHSSDAEAAVNNAS
FSQPVQSEDTVKESPDEKLVQPEQPLIREPQIRTPDSNDVSHDTLAEGEDGWQPVQKPRS
SGLFGKRLWQRRQHGTKIFNQQKNDLVAELELATLKNNHQSGKFYVLKKRAVPAGSIAEY
YVAKTSSPGAKYGWKAVKTVAYRVKSVSSTNIDGSRENSKNEDETLCSPTDSRPVSAQKE
VGTVAKRSSIVSLGKSPSYKEVALAPPGTISMLQVRHPKDEEPEEQDKQAQEKSMSTAES
SQNDQEGNIQDSVMGSTAQLRNENEALEEKEEIHPDSAKNHEKLVVVSECMVEVQSSQNE
ELGTHTDNVSNCAHSSSETGTCTEDLLVCKSNNDSETTLQGVEEQKLELPVTCPGDSREV
SNKKLSALAAPYNPSVVSPRVAPLPMNIALSSGPGAVQGHATLLPSPISSPHHPYPSPPT
TPNMLHPLPFVYPPYTQAPSLSPSTFQLTSNQFHHGQFAWQCNVRANTQEYIPVTLWPGC
HPLEFPSPTVVEPIAKPILEEKEQTINSENLNLALPLDLDSGNESKKEIDLPASEAVENL
RDNVVQSGNGEEISASNFNGLPFAVNLLHSSNGPTEESERCNDYHVQRQQCKPDSEKTIN
VLVRGKRNKKHMLRMPLSLLKRPYSSQPFKVVYSRVVRETS
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atggtgcactttttttcattactatttaaactttacatattccttccaaagtacaacctt
ctgcagctctacacagcaggtttggaaatggcaccgaagagtggtcgcggcaagacgaag
ggagacaagaagaagaaggaagaaaaggttcttccagtcgttgtggatattaaagtgaat
ctgccagacgagactcatgttattttgaagggaatttctacggatagaatcatagatgtt
cgtcgattattgtccgtcaatacagtaacgagcaacatcactaactactcgttatctcac
gaggtgaggggcccacgattacaagatgcagtggacgtgtccgcactgaaaccctgcacc
ctcacgctagtggaagaggactacgatgaagatagcgcaacggcgcacgttagacggctg
ctggacatcgtcgcctgcacgacgtcgtttggaccgtcgccggaaaaggtcgcctctcct
acggcggcctccgcgaattccaagggcagagaagagggcaaagatggtcgtggaactcag
gacggaaaggtttctaagaaagcgggcaagtctccccgcgcgaagaataagaaagacagt
tctccgccgccgctgccggcggagtcagatccgaaggacgggtctgcagctgcgattgat
agagaaggagagatgagcaacacttctccgaagcttgggagcttctacgagttcttctct
ctctctcacctcacgcctcctcttcaatttataaagagggtggagaggaaaagtatcgat
gacctttctggtgatgatgataaccttttctttcttgaggtgaaattgtgcaatggcaaa
ttgatttttatagaagcttcaaggaaaggtttttatggcactggaaagcagcagattttt
tgtcataatctggttgacctgctgagacagctcagtagagccttcgataacgcttatgat
gaactcatgaaagcattctcagaaaggaataagttcggaaaccttccttttggcttcaga
gccaacacatggcttatcccacctgtagcggcgcagtcaccatctacatttctccctctg
cccacagaagacgaaaaatggggtgggaatggaggtggtctaggcagagatggcaaaagt
gacctgctaccttatgctaatgaacttttgtttcttgcatccatgccatgcaaaactgct
gaggagaggcaaattagagatagaaaagcttttctgcttcacagtttatttgtcgacgtt
gcaattttcagggccattgcatctatgaaacatgtagtgcaaactccagaatattctaat
tattcttcaaaaagtcaaattatctatacagagaaagttggggacttgagcataactgtc
atgaaagatgcatctaatgctagttgcaaaatcgatactaagattgatggagaacaagct
ataggattggatgacaagaaactggttgaaagaaacctgcttaaggggatcacagctgat
gaaaatacggctgccaatgatattgccactttaggtgttgtaaatgtgaggcattgtgga
tatattgcatgtgtgaaagtccaagggatggacaatgcaagtgcaaatactccactgcga
agccaattgcttcttgaacagcctgatggtggtgctaatgccctaaatattgatagttta
agggtattactacatgaaaatgctacaactgaacaaaataaagcatctgcacattctcaa
acattggaatctgagcaacttgaatattcccaagcatttgttgagagactgttgcaagac
agtctgggtgagctttgtgaagaaaaacgtgatctggatgcttttgtgagatgggaactt
ggaacctgctggatacaacatttacaagatcagaagaaaacagaaaaagagaagaaactg
tctaatgagaaagccaaaaatgaaatgaaggttgagggactaggaacaccgcttaaatcc
cttaaaagtagaaagaagacattagatggaagtgcggtagaccaacaaaatgagatcgtt
aaatctgctgctgatgatgtgaaggatgacgctgaaaaaacattgaatgtgacagaatct
cagattgataatggtgcaattgaaaatgagattatgttaaaatcattgttgtctgatgct
gcattctctcgattaaaagagtcagagactggacttcatgcaaagtcactgcaagaactg
attgagttatcccaaaaatattatgatgatgtagcactgccaaaactggttgcagatttt
ggttctttagagctctcaccagtagatggtcggacattgacagatttcatgcatactaga
ggtcttcggatgcgatcacttggacaagttgttaagctttcagagaagttatcacatgtg
caatctctttgcatacatgagatgatagtacgcgcttttaagcatatcctgcaggcagta
atatcagcagttgagaagcctgagaaaatggccgcagcaattgcagcagcactgaattta
atgcttggagttcctgaaagtaaacaaccagatcagccatctggtgtcaattctcttgtg
tggaattggcttgacgtgttccttatgaagcgctacgaatggaatataaagaatttcaaa
tatgaagacattagaaaatttgcgatccttcgtggtttatgccataaggtgggtattgag
cttgtaccaagagactttgatatgaaatctgcacacccttttcagaaggaagatatagtc
agccttgtaccagtgcataagcaagcggcatgctcatccgctgatggacggcaactcttg
gaatcctctaaaactgccttggataaaggaaaacttgaagaagctgttagctatggaaca
aaggccctcgcaaagttggtagcagtatgtggtccttatcaccgcatgacagctggtgct
tacagccttcttgcagttgttttatatcacactggagatttcaaccaggccgctatctat
cagcaaaaagcgttggatatcaatgagcgagagctaggtcttgatcatcctgataccatg
aaaagttatggggatcttgctgttttttattacaggctacagcacacggaattggctctc
aaatacgtgaagcgagcattatatcttttacatctcacttgtggcccatcacatccgaat
actgcggcaacatacataaatgtggctatgatggaggaaggcctgggtaatgtgcacgtt
gcactaagatatctacataaagcactgaaatgcaaccaaaaacttcttggcccagaccat
attcagactgctgcaagctatcatgccattgcaatagccctctcattgatggaagcatac
cctctaagtgttcagcatgaacagacaacattacaaatacttagggcaaagctgggacca
gatgacctccgaactcaggatgcagctgcgtggcttgaatactttgaatcaaaggctttt
gagcagcaagaagctgctcgaaatgggacacgaaagcctgatgcttctatagccagcaag
ggccacctaagtgtatcagatttgcttgactacataaatccaagtcaggatgctaaaggg
aaagaagccatgggatcaaagagaagaaatcacattgcaaaggctaaggagaaagttatt
catgacaatctagccacctcagatactgaagttcccccgaaagtttcctttacaacggag
gcaaaggaagatgaacaagtccacagctctgatgctgaggcagctgtgaacaatgcgtca
ttttctcagccagttcagtccgaagacactgtgaaagaatctcctgatgaaaaacttgtc
cagcctgaacagccattaataagggaacctcaaatcagaactcctgattccaatgatgta
tcacatgatacacttgctgaaggagaagacgggtggcagccagttcaaaaaccaagatca
tctggcttgtttggaaaacgactatggcagcgacgtcagcatggaactaagatttttaat
caacagaagaatgatcttgttgctgaattggaacttgccacactgaagaataaccaccaa
agtggaaaattttatgttttaaagaaacgtgcagttcctgcaggaagcatagcagaatat
tatgtagcaaagacttcatccccaggggctaagtatggatggaaagctgtgaaaactgta
gcatatagggtgaagtccgtttcatcaaccaacatagacggttcaagggagaactccaaa
aatgaagatgagacattatgctctccaacagactcaagaccggtatctgcacagaaagag
gttggaactgttgccaagagaagttcaatagtaagtctgggtaaatctccttcatataag
gaagtagctctggcaccacctggtaccatatctatgttgcaggtgagacatcccaaggat
gaggaacctgaagaacaggacaaacaagcccaggaaaaatctatgtccacagcagaaagt
tcgcagaatgatcaagaaggaaacatccaggattcagtcatgggttccacagctcaactg
agaaatgaaaacgaagctcttgaagagaaagaggaaatacaccccgatagtgcaaagaat
catgaaaaattggtggttgtatctgagtgtatggtagaagtgcagtccagtcaaaatgaa
gagcttggtactcacacagataatgtatcaaattgtgctcactcttcgtcggaaactggt
acttgtactgaggatctattggtctgtaaatccaataatgattcagaaaccactttgcaa
ggggtagaagaacagaaattagaacttccagtgacatgtccaggtgactctagagaagtt
tctaacaagaagttgtcagctttagcagctccatacaatccatcagtcgttagtccacgt
gttgcaccattgcctatgaatattgctctctcttctggtccaggagctgttcaaggacat
gctactcttttgcccagtccaatttcctctcctcaccacccgtatccttcgcccccaaca
acaccaaacatgctccaccccttaccatttgtgtaccctccttacacacaggccccgtcg
ctatcacctagcacttttcaattaactagcaaccagtttcatcatggtcaatttgcttgg
caatgcaatgtacgtgctaacacacaagaatacattcctgtcacactttggcctggctgc
catccattagaatttccctcaccaacagtggttgaaccaattgctaaacctattttggag
gaaaaggaacaaaccatcaactcagagaacctaaatctggcattaccattggatctcgac
tctgggaatgagtctaagaaagaaatagatcttccggcatcagaggcagtggagaactta
cgtgataatgtggttcaatcaggtaatggggaggaaatcagtgcatccaatttcaatggt
ctgccctttgctgttaaccttttacatagcagtaatggtccaactgaagaatccgagagg
tgcaacgattatcatgttcagagacagcagtgtaagcctgacagtgagaaaacaatcaat
gttttagttagagggaaaaggaacaaaaagcatatgttgcgaatgccattaagtttgctc
aaacgaccatatagttcacagccattcaaagttgtatatagtagagttgtcagggaaact
tcctag
DBGET
integrated database retrieval system
