KEGG   Salvia splendens (scarlet sage): 121804422
Entry
121804422         CDS       T07627                                 
Name
(RefSeq) uncharacterized protein LOC121804422
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121804422
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sspl03041]
    121804422
Spliceosome [BR:sspl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    121804422
 Complex B
    121804422
SSDB
Motif
Pfam: RRM_1 RBD_DEAH11 M-factor
Other DBs
NCBI-GeneID: 121804422
NCBI-ProteinID: XP_042059895
LinkDB
Position
5:complement(6246754..6253259)
AA seq 1012 aa
MAGSDSQHRNTNEMSLEDILDGTSARTRPMSYDEIMRRRKNKGDTAQQVSSSYGAVDSEL
AQENVERESDILECLPRISDDSKPLAESRNINDLVKVRSRRKSDVNASRKNENSVQDNAD
RSRYPDAKSKDKGDRIPRRNRVSDEIFEGRNHGSRKTDALSRVSSDNGREKRKDSESYKQ
DRVSERSRIKSEIVKAQPHKDERQIHRKRKTDEQIGSDSDHEHKKRDVRDVRKTDNLNAR
GREKSVKEKKHKHNPEEDKSRGRDSVKKNDSVRKGTEPTRTYLEGSRSKRRRSQRKDREK
NVGKRSLSQSPKAHKHTSKDKREIAEPSSHSTKDKSGREHSNVDNKRMPSTGSTSHYRRN
TNNSSGLGGYSPRKRKTEAAAKTPSPTRRSPEKRAAGWDMQPVEKESVIATTTLFNLNAT
SQKLSLYNMEYPVAPPPVVKPIGISLHSISSQLHAVESIQLTQATRPKRRLYLENLPVSA
SEKDLIECINKRLLSSGVNYVQGTQPCISCIIHKEKSQALLEFLTPEDASAALSLDGMSF
SGSDLKLRRPKDYANVTTGPSDKSVGVVDSISDIVEDSPHKIFIGGISKFLSSRMLLDIA
RAFGPVKAFHFELIADTNETCAFLEYVDHLVTSKACAGLSGMALGGQVLTAVLATPEPDL
ENAGKLPTYEIPEHAKPLIKKPTTVLKLKNVLNPDDLISLSELELEEILEDIRLECSRFG
MVRSINVAKKTNAVGTVELNEISNTSACTDAYDFHYANRSHRVEQPSGSASGVREFEKSE
TLEAPTELENNIRILEEKNGCDNITGSSDVSSGSLEPDNITRSTVADESLSNEITASNIA
RDEVCELPFNGEDASFKEPASQSNPEDFTGESGNQQHTSDTEQMTKCNNSSSSSVMNYEL
ENKPSTNNLIEDHNAKLQRSEQALEIEERNEVVNVELDSIGRKQLDAPGEGDRNNVFVDL
GHIFEPGSVILEYRRLEAACVAAHSLHGRTFDGRVVTVEYVGHDLYQMWFRR
NT seq 3039 nt   +upstreamnt  +downstreamnt
atggctggatctgattcacaacaccgaaatactaatgaaatgtcactggaggatattttg
gatggcacttcagcgagaacaagaccaatgagttatgatgagataatgcgtagaagaaaa
aacaagggtgatactgctcaacaagtgtccagcagctatggtgcagttgatagtgaatta
gctcaagagaacgtggagagggaatctgatattctagaatgtcttccacgaataagtgat
gattcaaaaccactggctgaaagcagaaacataaatgatcttgtgaaggtaaggtctagg
agaaaatcagatgttaacgcatctagaaagaatgagaattcggtccaggataatgcagac
cgatctcgatatcctgatgctaagtcaaaggacaaaggagacaggattccaaggcgcaat
agagtgtcagatgaaatatttgagggaagaaatcatggcagcagaaaaacagatgcccta
tcaagagttagttctgataatggacgtgaaaagaggaaggatagtgaatcatataaacag
gatagagtttctgaaagaagcagaatcaaatctgaaatagtaaaagcacaaccacataaa
gatgagagacagattcacagaaagaggaaaacagatgagcagataggcagtgattctgat
catgagcataagaaaagagatgtgagagatgttaggaaaacagataacttaaatgccaga
ggcagagagaaatctgtaaaggaaaagaaacacaaacataaccctgaagaagataagtct
agaggcagggatagtgttaaaaagaatgattctgtaagaaaagggacagaaccaacacgg
acatatcttgaaggatccaggtcaaaaagaagacggtcacagaggaaagatcgcgaaaaa
aatgtaggtaaaagatctctttcacagtcaccaaaggctcacaaacacacatcgaaagat
aaaagggagattgcagaaccatcatctcattctacaaaagacaaatcaggaagagaacac
tctaatgttgataacaagaggatgcccagtactggatctactagtcactacaggcgtaat
actaataattcgagtggtcttggaggctattcacctagaaagagaaaaacagaggctgct
gctaaaactccttccccaactcgtcgttctccggagaaaagagccgctggatgggatatg
caacctgttgaaaaagagagtgtgatagctacaacaactcttttcaatttgaatgctaca
agccaaaaattatcactgtataatatggagtaccctgtggctcctcctcctgtagtgaag
cctattggaatttctctccattccatatcttcacagctgcatgctgttgagtcaattcag
ctaactcaagcgacaagacctaagaggaggctttatctagaaaacttgcctgtttcagca
tctgagaaagatttaatagaatgcattaacaagcgtttgctgtcatctggtgttaactat
gtccaagggacccaaccttgtatcagctgtataatacataaggaaaagagtcaagctctt
ttagagtttctgacccctgaggatgcttctgctgctctctctttggatggaatgtccttt
tctggttccgatcttaaactcagacgtcccaaggactatgctaatgtaactactggtcct
tcagacaaatctgtgggtgttgttgattcaatcagtgacattgtagaagattcaccgcac
aagatctttatcggtggcatatcaaaatttctttcttctagaatgcttttggatatcgct
agagcctttgggcccgtgaaagcattccactttgagttaatcgctgatacaaatgaaaca
tgtgcatttctcgagtatgtcgatcatttagtgacttcaaaggcatgtgctggtcttagt
ggcatggcattgggtggacaagtcctaactgcagtacttgctactccagaacctgatttg
gaaaatgctggaaaattgcctacttatgagatccctgaacatgcaaagccccttatcaag
aagcctacaactgttttaaagctgaagaatgtgttaaaccctgatgacctcatttcattg
tccgaattggaactagaagagatattggaagatataaggctggagtgttccaggtttggt
atggtgagatctattaatgttgccaagaaaacaaatgctgttggcaccgtggaattgaat
gagataagcaacacgagtgcttgtactgatgcatatgactttcactatgcaaataggagc
catagagtcgaacaacccagtgggagtgcatctggggttagagagttcgagaaatcagaa
actctggaggccccgaccgaactggagaataatattcggattttggaagagaaaaatggt
tgtgataatattactggctcatctgatgtgtcaagtggatcacttgagcccgataatata
actaggtccacggtggctgatgaaagcttgtctaatgagataactgccagcaatattgca
agagatgaagtatgtgaactaccattcaatggtgaagatgcttctttcaaagaacctgca
agccaatcaaacccggaagattttactggagaatctgggaaccaacaacatacttcagat
actgagcagatgaccaaatgtaacaattccagttctagttctgtaatgaactatgaactt
gagaacaaaccatctaccaacaacttgatagaagaccataatgcaaaactacagagatct
gagcaagcgttggaaattgaagagagaaatgaagtagtaaatgttgagttggatagcatt
ggcagaaaacaattggatgctccaggggaaggtgatagaaataatgtttttgtggatctt
gggcatatctttgagcctggctctgttatcctagaatatagaagactggaagctgcttgt
gtggccgcacattctctacacgggcgtacatttgatgggcgtgttgtgactgtggaatac
gttggtcatgacttgtatcagatgtggttccgcaggtaa

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