Salvia splendens (scarlet sage): 121804658
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Entry
121804658 CDS
T07627
Name
(RefSeq) nuclear-pore anchor-like
KO
K09291
nucleoprotein TPR
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121804658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121804658
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121804658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
121804658
NCBI-ProteinID:
XP_042060222
LinkDB
All DBs
Position
5:12194928..12215054
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AA seq
2057 aa
AA seq
DB search
MPLFVSDEEYRRCSHDAALLTEKADDFIRGLYNQIETVKAEADAASITLEQTCALNEQKY
VSLSAEYSSLQLQISETSALLEQRDAEIAGLKVEKQQFLLQSIEKDGEVERLMREASELH
RSKRQLMELVEQRDLEINEKNATIKSYLDKIVNLTENLASKDARIRDIKSELGRLHATSD
RFLQEKELLERHNTWLNEELTTKVNDLIQVRKEYGVYEADMSGKLADVEHKLKESANSLK
FHKDKARELEEKLASMEIELLSTKDAAAAAEQRSSAEISTITKLADLYKESSEEWSKKAG
ELEGVIKALETHLNQVETECKDKLDKEVSARKEVEKEYADLKDMLQSCQTELEKLKRGNE
LQHLPLSSFTTGLLTNSVDADEMVLDDRAIIPIVPAGVSGTALAASLLRDGWSLGKIYAK
YQEAVDALRHEQLGRKQSQAILERVLYEIEEKAGVIMDEREEHERLVEAYSALDQKLQQT
LSGHSALQITIQELKATLKRQERDYAVAQKEIVELQQQVAVLLKECRDVQLRCGSVSPYQ
NDQLISGISVPVGTESRSENVILDRLLTFKDINGLVEQNVQLRSIVHNLSDQIEDSGAEL
KEKCEKELQMHKEETVSKVKAVLLRAEEQERMIESLHTSVAMYKKLYEEEQKLRAYPTHA
LEAVPERGGREIIPIQENSHEASRKHEHTLERLRSLEEDLAKSKNDLISLRSDRDRLETV
AMFAEEKLARFMKEFEQQREEHNGIRARNVEFSQIIVDYQRKLRESAESLDAANELSRKL
TMEVSIVKQEKEMLQNSEKRASDEVCSLSERVHRLQATLDTMQSAEEVREEARGVERRKQ
EDYVNKIEREWAEAKGELQEQRDLVRSLSLEHGSSLKDAHKQIDELNKELANSMRSVANA
NSRAAIAEARYSDLEKIMESTRTKDSDGADSGPSSSSEKMVAKFRGEIEKLREEAEASKN
HMLQYKSIAQVNEEALTQLELAHENFKKEADEVKRLLENEIHLLREHVNELESECKLKTE
EAISATSGKEEALAGALSEIASVKDAFSVKISQIVVMESQISTLKEDLESEHKKWRTAQD
NYERQVILQSETIQELMKTSQALDLAQKEASELRKVVDVLKTENVELKSKWETEKLAIEV
YRNEADKTYTEINELNKILHSQLEALHIRLAEKEKGIASGSSSKNLGGDDGLQSVVNYLR
RSKEIAETEISLLKQEKHRLQSQLESALKSAESAQTLLQAERGKSHASLLTDDEFQSLQL
QVREITLLRESNVQLREENRHNFEECLKLREAFQNAKIEIENLEKLLRDTDRDLEAYRKE
VEILKEEKMHLEKRIDELVQKCKDVDVNDYNQLKESSKQMQMSLAEKDSRLEEVEKLLLE
KQETVSILERDLARSKTEVSERENKINEVSQTEASQKSEIDKLKRYNMQARRKFENLAKE
KDEMSKEVQSLSKQLEEARQALSKQLEEAKLVKRNTVDSGEQTLREKEKDTRIQILERTV
ERQRDDLKKEKEDHHKEKQKFLKIRKTIIESHENVIQEKRRITDDLTKHKQALKALQDEV
EKIKNPGGNQSESASSNILDDFASAYFLAVDNFEQLAQPAFGVPDSTTTDAPPLDNATSA
AVPTGQAVPSSQTPEPPAASVPAARAEEKEKRPALTKANVKMGRKLVRPNITKPKEPQGD
VEMTEGDESNTGLPSHSTEIQGTVGAPTTASARKRMQDEMVTTEETTSDVPAPLHKKSKA
PDSLQVGGDELAAAPTKLPEAVITEESSDDMGNPQQIKEEVVEKDELDTGEDQTVEPLAD
EEFSEPVDAADEKLEKPSDSMLSDDQLRDQTELDIQRIVAESGGEKEEGEVVGDFADNDG
DSSIINETGGPGNGELQGEQSADPEKSPSIEPLGLEAGEIDTSDTLEEEKIGDLNETITD
SSDKLIHGADSSAETDRAPGSSNPPSEEASTSTTIAIVDVGSSDQPGSTPPQDSGAKPVS
PLNSGGSTPPQDSGAKPVSPLNSGATTINLQERARQRAHLRQAGMGGVTSSPSRARGRTV
RGRGVRGGRTGRGQSPG
NT seq
6174 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttttcgtatcggacgaagaataccggcggtgctcgcacgatgcggcgcttttg
acggagaaagcggacgacttcatccgtggactgtacaatcaaatagagacggtgaaggcg
gaggccgacgctgcctccatcactctcgagcagacgtgcgcactcaacgaacaaaaatac
gtttccctttccgcggagtactcctctctccagttacagatctccgagacaagtgctttg
ctcgaacagcgcgatgctgaaattgcggggctgaaagtcgagaaacagcaatttctgctt
cagtctattgaaaaagatggggaggtagagaggttgatgagggaagcatcagagcttcat
agatcgaagaggcagctgatggagttggtggaacaaagggacttggaaatcaacgagaaa
aatgctacaataaagagttatcttgataagattgttaatctgactgaaaaccttgcatca
aaagatgcacggataagggacataaaatctgaattggggcgattgcatgcaacatccgac
cgttttttgcaggagaaggagcttctcgagaggcataatacatggcttaatgaggagttg
acgactaaggttaatgatctgatccaggtccggaaggaatatggagtatatgaggctgat
atgtctggcaaacttgcggatgttgaacacaaattgaaggagagtgccaattctctgaaa
tttcacaaagacaaggcgagggagttggaggaaaaactggcatcgatggaaatagagttg
ttgtcaactaaggatgcagcagcagctgctgagcagcgttcctcagctgaaatttcaaca
ataaccaaacttgctgatctatataaagaaagctcagaggaatggtccaagaaggcagga
gaacttgagggagtcatcaaggctcttgaaactcacttaaatcaagttgaaactgaatgt
aaagataagcttgacaaagaagtgtctgcaaggaaggaagtggaaaaggaatatgctgat
ttaaaagatatgctacaaagctgccaaacagaattggagaagttaaaaagaggaaatgag
cttcaacaccttcctctgagtagttttaccactggcttattgacaaattcagttgatgct
gatgaaatggttttggatgatcgagcaattattcctattgttcctgccggagtttctgga
acagcattggcagcttcacttcttagggatggatggagtctggggaaaatatatgcaaaa
tatcaagaggctgttgatgctctacggcacgagcagttggggagaaagcaatcccaagct
atattggagcgtgtgctttatgaaattgaagaaaaagctggagtcatcatggatgaaaga
gaagaacatgaaagacttgtcgaggcctactctgctttagatcagaaactgcagcagaca
ctatcaggacattccgctctgcagattaccattcaggagctcaaggctacattaaagagg
caggagcgtgactatgcagttgctcagaaggagattgttgagctccagcaacaggtggct
gtactgttaaaggagtgtagagatgtccagttgcgttgtggatcagtttccccttatcaa
aatgatcagctcattagtgggatttctgtgccagtgggtactgaatctagatctgaaaac
gtcatattggaccgcctgttgaccttcaaagacataaatggattagttgaacagaatgtt
cagctgcgcagtattgttcacaatctatctgatcagattgaagatagcggagcagagtta
aaggaaaagtgtgagaaggagcttcagatgcataaagaagagactgtgtctaaagttaaa
gcagtattgctgagggcagaggaacaggagcgcatgattgagtcgcttcatacctctgtg
gccatgtacaagaagctctatgaagaggagcaaaaacttcgtgcttatcctactcatgcg
cttgaagcagttccagagcgaggaggcagggagattatacccatacaagaaaatagccat
gaggcatcaagaaagcatgaacatactttagagcgtctgagaagtctggaagaagatttg
gcaaagtccaagaatgacctcatatcattacgatctgatcgtgatagattggaaacggta
gcaatgtttgcagaagaaaaacttgccaggtttatgaaggagtttgagcaacagagggaa
gagcataatggaattagagcaagaaatgttgagttctctcagataatagttgactaccaa
aggaaacttcgtgaaagtgcagagtccttggatgctgctaatgaactgtctcgcaagttg
acaatggaggtatcaattgtgaagcaagaaaaggaaatgcttcagaactctgagaaaaga
gcttctgatgaagtttgtagtttgagtgagagggttcatcgacttcaggccactttggac
accatgcagagtgcagaggaagtgcgtgaggaggctagaggtgttgagaggagaaaacaa
gaagattatgtaaacaaaattgagagagaatgggctgaggcaaaaggagaacttcaggaa
caacgagatcttgttcgaagcctttctcttgagcatgggagtagtttgaaggatgctcat
aaacaaattgatgaattgaataaagaattggctaactctatgcgatctgtggcaaatgct
aattctagagcagcaattgcggaggctcgatattctgatctggagaagattatggaatct
acaaggacaaaggattctgatggtgctgatagtggaccttcttcttcttctgaaaagatg
gtggccaagttcaggggtgaaatcgagaaattaagggaggaagcagaggcaagcaaaaat
cacatgcttcagtacaagagcatcgctcaagtaaatgaagaagccctcacacagttggag
ttggcccatgagaattttaagaaagaggctgatgaagttaagaggttgctagaaaacgag
attcatttgctcagggagcatgttaatgaacttgagagtgaatgtaagctgaagactgag
gaagcaatttctgcaacttctgggaaagaagaggctcttgctggtgctttatctgagatt
gctagtgtgaaggatgcattttctgttaaaatatcacagattgtagtcatggaatcccaa
atctctacattgaaagaagacttggagtcggagcataagaaatggcgaactgctcaagac
aactatgagagacaggttattctacaatcagaaactattcaagagttgatgaaaacatcg
caagccttggatttggcacaaaaagaggcatctgagctccgtaaagtggtagatgtgcta
aagacagaaaatgtggagcttaagtcaaagtgggagacagaaaagttggccattgaagta
tataggaacgaagcagataagacgtacactgaaattaacgaactaaacaagattttgcac
agtcaacttgaagccttgcacattaggttggctgagaaggaaaagggaatagcttctgga
agcagttctaagaaccttgggggtgatgatgggttgcaaagtgttgtgaactatctccga
cggtcgaaggaaatagctgaaacagaaatctcattattgaaacaagaaaagcatcgcttg
caatctcaattagagagtgctttgaagtcagccgagtctgcacaaacattgcttcaagca
gagcgaggaaaatcacatgcatcgttgcttacagatgatgaatttcaatctcttcaacta
caggtcagagagattacattactgcgtgaaagcaatgtgcaactcagagaggaaaaccgg
cataattttgaagaatgcctgaaacttcgtgaagcatttcagaatgctaaaattgaaatt
gagaatttggagaagcttctaagagacacagacagagatttggaagcatatagaaaagaa
gttgaaatcttgaaggaagaaaaaatgcatcttgaaaagagaattgacgagttggtacag
aagtgcaaggatgttgatgtcaatgattataatcagttgaaggaatcttcaaagcagatg
cagatgagcttagcggaaaaggatagtcggctggaggaagttgagaagcttttattagaa
aagcaggaaacagtatcaattctagagagagacctagctagaagcaaaacagaagtgagt
gaacgagagaacaagattaatgaagtctcacaaactgaagcttctcagaaatccgagatt
gataaacttaagcggtataatatgcaagcgagaaggaagtttgaaaaccttgcaaaggaa
aaagatgagatgagcaaagaggtccagtctttgtccaaacaattagaggaggctaggcaa
gccttgtccaaacaactagaggaggctaaacttgtaaaacgaaatactgtcgattctgga
gaacagacgctgagagaaaaggagaaagatacgaggatacaaattctagaaagaacagta
gagaggcaaagagatgatcttaagaaagaaaaagaagatcaccataaagaaaaacaaaaa
tttctaaagattcggaaaacaataatcgagtctcatgaaaatgtcattcaagaaaagagg
agaatcaccgacgaccttacaaagcataaacaagctttgaaagctcttcaagatgaagtg
gaaaaaataaagaaccctggaggcaatcaatcagaaagtgcatctagtaatatattggat
gattttgcttctgcctatttcctggctgtagataattttgaacaattggcacagccagct
tttggtgtccctgactctaccacgacagatgctccacctcttgataatgcaacatctgct
gcagttcccaccggtcaagcagtaccatcatctcaaacccctgaacctcctgctgccagt
gttcctgcagcaagagctgaggagaaagagaaaagacctgctttaacaaaggcaaacgtt
aaaatgggaaggaagctggttcgtcctaatattacaaagcctaaggaacctcaaggtgat
gtggagatgacagaaggagatgaatctaatactggattaccatctcatagtacggagatt
cagggaactgtaggtgctcccacaacagcatctgcacgtaaacgaatgcaagatgagatg
gtcactacagaagagactacctctgatgtcccagcaccgttgcataaaaagtcaaaagct
ccagatagcctacaggtgggaggtgatgaactagctgctgctcccacaaagctacctgaa
gctgttatcactgaagaatcatcagatgatatgggaaaccctcaacaaattaaggaagaa
gttgttgaaaaggatgagcttgacactggagaagatcaaactgtagaaccattagcagat
gaagagttcagtgaaccagttgatgctgcagatgaaaaattggagaaaccaagtgactct
atgctatctgatgatcaactgagagatcaaaccgaactagatattcaacgcatagttgca
gaatcaggtggtgagaaagaagagggagaggtggttggagattttgctgataatgatggt
gatagcagtatcatcaatgagacaggaggaccaggaaatggagaattacaaggtgaacaa
tcagcggaccctgagaaatcacctagtattgaaccattgggcttggaagctggggagatt
gatacatccgatacactagaggaagagaagataggtgacttaaatgagaccataactgac
agttctgataagcttatccatggtgcagattctagtgcagaaaccgacagggcacctggt
tcatccaatcctccctctgaggaagcatcaaccagcactactattgccattgttgatgtt
ggatcttcggatcaacctggatcgacgcccccacaggacagtggtgcaaaacctgtgtca
cctctgaacagtggtggatcgactcccccacaggacagtggtgcaaagcctgtgtcacct
ctgaacagtggtgcaacaaccattaatctacaggagagagcaaggcagcgagcacacttg
aggcaggctggcatgggaggggttacttcttcaccaagcagagctcgtggccgaacagtt
cgtggtcgtggtgtacgtggtggacgcactggacgtgggcaatcccctggttaa
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integrated database retrieval system