Salvia splendens (scarlet sage): 121804742
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Entry
121804742 CDS
T07627
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
121804742
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sspl01001
]
121804742
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121804742
Enzymes [BR:
sspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
121804742
Protein kinases [BR:
sspl01001
]
Serine/threonine kinases: Other
VPS15 family
121804742
Membrane trafficking [BR:
sspl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121804742
Autophagy
Autophagosome formation proteins
PI3K complex
121804742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
VPS15-like_hel
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
HEAT
PK_Tyr_Ser-Thr
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Keratin_2_head
Cohesin_HEAT
TCAD9
HEAT_EZ
Beta-prop_Vps41
APH
Beta-prop_IP5PC_F
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
121804742
NCBI-ProteinID:
XP_042060319
LinkDB
All DBs
Position
5:complement(13872385..13881462)
Genome browser
AA seq
1548 aa
AA seq
DB search
MGNKIARTTQASATEYYLHDLPSSYNLVLKEVLGRDRFLKSILCKHDEGLVLVKVYFKRG
DSIDLRDYERHLVRIRDIFSKLDHPHVWPFQFWLETDKAAYLLRQYFFNNLHDRLSTRPF
LSLVEKKWLAFQLLYAVKQSHEHGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDD
PSDFSFFFDTGGRRRCYVAPERFYEHGGETQVSQDANLKPSMDIFSVGCVIAELFLEGQP
LFELSQLLAYRRGQYDPTQHLEKIPDSGIRKMILHMIQLDPESRCSAESYLQNYAGVVFP
CFFSPFLHKFYSLLNPLSCDARVLACETSFQEILRQMLGNRAVEDVVSETETSNNDTSHL
PEHVKQGSTGADKSSNERKETKKGITCDRFDLLDNMSTLLRNVKLNNGNLSMETMQDSSV
KTIDSQNQKHSGLQSPGEVIQSISNKFQRSHHPFLKKITMTDLSSLISDFNNQSDSFGMP
FLPLPQDILSCEGMVLIASLLCSCIRNVKVPFIRRAAVLLLKSCSLYIDDEDRLQRILPY
VIAVLSDPAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRIC
YGSNISKLALTAYGFLIHSISLTEAGVLNENSSRKTSLPASDFYGEPQRLNNDAQLGQLR
KSIAEVIQELVMGPKQTPNIRRALLQDIGNLCWFFGQKQSNDFLLPILPAFLNDRDEQLR
TVFYGQIIYVCFFVGQRSVEEYLLPYIEQALIDTTESVIVNALDCLAILCRSGFLRKRIL
LEMIERAFPLLCYPSKWVRRAAVTFIAASSENLGAVDSYVFLVPVIRPFLRRQPASLASV
KALLGCLKPPVSREVYHQVLENARSSDMLERQRKIWYNASSQSRKSEAIDLLQRTAKELD
PIKCMSDRQNDFGHHSFTSTSAEQFDSSKLDDNEGRFKAMGNLMQNSLSQEEAHDRGASE
KSQLSGFMSPQMSCMNSFIEKSAESVPLYQFKFDHRRTSTTAPAVSDTSLPYNSLGFSTS
SLPWMDPVNKSFSLASTIPPPKLVSGSVYVGNGPAQLRRVVHEVDDRETDETAFVGSKFH
ETGVPDRIKGGSLTIGDNSVEATESTSLAWSSTIPDSGWRPRGVLVAHLQEHRSAVNDIS
ISMDQQFFVSASEDSTVKIWDCKKLEKDISFRSRLTYSLGGSRAMCVAVLQGTTQIVVGA
SDGMMHMFSVDHISRGLGNVVENYSGITDVKKTGFGEGAILSLLNYSADGNTSQMILYST
QNCGVHLWDTRTNSNSWNTKVSPEEGYISSLVADPCGNWFVSGSSRGVLTLWDLRFCIPV
NSWQYSLPCPIEKMCLFVPPSGTPLSVATRPLVYVAAGCNEVSLWNAENGSCHQILRAAN
LESDAENSESPWALARPSSKTNSKSEIRRSTNSKYRVDELNEPSIRVPGIRALLPLPGGD
LLTGGTDLKIRRWDHFSPERTYCVCGPSIKGIGNDDFYETKSSFGVQVVQEAKRRPLATR
LTGKAILAAAATDSAGCHHDSVLSLASVRLNQRLLISSSRDGAIKVWK
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaagatcgcgcggacgacgcaggcctcggccacggaatactatctgcatgat
ttgccgtcttcgtacaacttggtgctcaaggaagtcctcggcagggaccgctttctcaag
tccatactctgcaagcacgatgagggtttggtgctcgtcaaggtctacttcaagcgcggc
gactcaattgatttgcgagactatgagcgccatctcgttcgcattagagatatattctcc
aagctcgatcacccccatgtctggcccttccagttttggcttgaaacagataaagctgct
tatttgttgaggcaatacttctttaacaatcttcatgatcggttgagtactcgaccattc
cttagtcttgtcgaaaagaagtggttggcttttcagttgctttatgccgtgaaacagagt
cacgagcatggagtgtgccatggcgatattaagtgtgagaatgtgttggtcacttcctgg
aactggctctaccttgctgattttgcatcatttaagcctacatatatcccttatgacgat
ccctctgatttttcattcttcttcgataccgggggaagaagacgctgttatgttgcacct
gagaggttctatgagcatggtggggagacgcaagtctcccaagatgcaaatttgaagcca
tcaatggatatcttttctgtagggtgcgtaattgctgagctttttctcgaaggccaaccc
ttgtttgaactttcccaactccttgcgtatcgaagaggacaatatgatcctacccagcat
cttgaaaagattccagattcaggaatccgtaagatgattcttcatatgattcaactagac
ccagagtcaaggtgctctgctgagagctacctgcagaactacgcgggtgttgtgtttcca
tgtttcttctcaccgtttctccataagttctattccttattaaatcctctgagttgtgat
gcaagggttctagcatgcgagacctctttccaagaaattcttagacagatgcttggcaac
agggcagttgaggatgtggtatctgaaacagaaacgtctaataatgatacaagccacttg
ccagaacatgtaaaacaaggttccactggggcagataaatcttcgaatgaaagaaaagag
accaagaagggcattacttgtgatcgatttgatctcctggataacatgagtaccttgcta
agaaatgtgaaacttaacaatgggaatttgagcatggagacaatgcaagatagtagtgtg
aagaccatagactctcaaaatcagaagcacagcggtttacaatctcctggtgaggttatt
caaagtatctccaataaattccagcggagtcaccatcctttcctgaaaaagatcacaatg
actgatttgagctcgttgatatcagattttaataatcaatcagattcttttggaatgcct
tttctgcctctacctcaggatatattaagctgtgagggtatggttttgattgcttcactt
ctatgttcttgcattcgcaatgtcaaggtcccttttataaggagggctgctgttttactg
ctgaagtcttgttctttgtatattgacgatgaagatcgactgcagcgtatccttccttat
gttatagctgtgctttcagatccagctgccattgtccgttgtgcagcactggagactttg
tgtgacattcttccgttagtcagggattttcctccaagtgatgccaaaatctttccggag
tatattcttcctatgctttccatgcttcctgatgatcctgaggaaagtgtgaggatttgc
tatggcagcaatatatctaaactggcactgactgcttatgggttcttgattcactcaata
agcctgaccgaggcaggggttcttaatgagaattcatcacgaaaaacatcactgccagcc
tcagacttttatggagagcctcagaggcttaataatgacgcccagcttggacagttacgg
aaatctattgcagaggtcattcaagaacttgtgatgggtccaaagcaaacaccaaacata
aggagagcactcctgcaggatataggcaatctttgttggttttttggccagaagcagagt
aatgattttttgctacctatcctccctgcttttctgaatgatcgcgatgaacagctgaga
actgtattttatgggcaaataatatatgtctgtttctttgtgggccaacgaagtgtagag
gaataccttttaccttatattgagcaagcgcttattgatactacggaatccgtgatcgtc
aatgcattggattgcctggccattctttgtagaagtggtttcttgaggaagaggatactg
cttgagatgattgagcgtgcgttccctttgctatgttatccaagtaagtgggtcaggaga
gcagctgttacgtttattgcggctagtagtgagaaccttggtgcagtagattcttatgta
tttctggtcccagttatacgccctttcttgcgcagacaaccagcatctttagcctcggta
aaagctcttcttgggtgtctgaagccgcctgtctcaagagaggtataccatcaggtttta
gaaaatgccagaagttcagacatgctggagagacagagaaagatttggtacaatgcatca
tcacagtctagaaaatctgaagccatagacttacttcagagaactgccaaggagctggat
cctattaaatgtatgtctgacagacaaaatgactttggacatcatagctttactagtaca
tctgccgaacagtttgattcctctaagttagatgataatgaaggcaggtttaaagctatg
ggaaatttaatgcaaaactctttgagccaagaagaagcccatgatcgtggtgcctcagaa
aaatctcagctctctggatttatgtctccccaaatgagctgtatgaacagcttcattgaa
aaatcagcagaaagcgtacctctataccagtttaagtttgatcacaggcggacatcaacc
actgctccagctgtttctgatacttcattaccatataattccttaggtttcagtacttct
tctctgccttggatggatccagtaaataaatcgtttagtttagcaagtacaatacctcct
cctaagcttgtttcaggatcagtgtatgttggtaatggtcctgcacaattgagaagggtt
gtacatgaagtagatgacagggaaactgatgaaacagcttttgtgggtagcaaatttcat
gaaacaggagttcctgacagaataaaagggggttctctcaccattggggataactcggtt
gaggcaacagaatcgacatcgttagcatggtcatcaactattcctgattcaggatggaga
cctcgcggggtgttagttgctcacttgcaagagcacagatctgccgtcaatgatatttcc
atttcaatggaccagcaattttttgtgagtgcttctgaagattctactgtaaagatatgg
gattgcaagaaactggagaaggacatctcatttcggtctagactaacctattctctaggt
ggaagtcgtgcaatgtgtgttgcggtgcttcaaggtactactcaaattgttgttggggca
agtgatgggatgatgcatatgttttctgttgatcacatctccagagggcttggaaatgtg
gttgaaaattattctggcataactgatgtcaagaaaactggttttggagaaggtgctata
cttagccttttgaattattctgctgatggtaatactagccaaatgattctatacagcact
cagaactgtggggtccatctatgggacacaagaacaaattcaaacagttggaataccaaa
gtttctccagaggagggttatatatcttctcttgtggcagacccttgcggtaattggttt
gtatctggatcatcaaggggtgtgcttactttgtgggatcttagattctgcatacctgtt
aactcatggcaatattctcttccatgccccattgaaaagatgtgtctttttgttcctcct
tccggtacccccttatctgttgcgacaaggccacttgtttatgttgcagctgggtgtaat
gaggtctctctttggaatgctgaaaatggaagctgtcaccagattttgagagcagcaaac
cttgaatctgatgctgagaattctgagtcaccttgggccttggccagaccatcttcgaag
actaactctaaatcagagataaggcgaagtacaaactcaaagtacagggttgatgaactg
aatgagccctcaattcgtgttcctggtatccgtgcattgctcccgttacctggtggagat
ttattgactggtggaactgatttgaaaattcgtcgttgggaccatttcagccctgaacgc
acgtattgtgtatgtggaccatctattaaaggcattggaaatgatgatttctatgagaca
aaatctagttttggagtgcaagttgtgcaggaagcaaaaagacgacctctagcaacgagg
ttgactggaaaagcaattcttgctgctgcggctactgattctgctgggtgtcaccatgac
tcggtactctctctggcgtctgtgagattgaaccagagacttctgatatcaagcagtaga
gatggagctataaaggtgtggaagtga
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integrated database retrieval system
