Salvia splendens (scarlet sage): 121804825
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Entry
121804825 CDS
T07627
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121804825
03036 Chromosome and associated proteins [BR:
sspl03036
]
121804825
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121804825
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Helicases
121804825
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121804825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121804825
NCBI-ProteinID:
XP_042060450
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All DBs
Position
5:complement(43335098..43339502)
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AA seq
679 aa
AA seq
DB search
MPSVAIAEAQSADKKKIKKHSGVAEMEVEDNHSAEKKLKKEKKSSKKAKLTDLDDSNSDS
PVKISKKEKKRKALEIDDNEEGRSGNTSEKKMKFVEEDEKEDNPNAVSNFRISAPLREAL
KAKGIEALFQIQAMTFNTILDGSDLVGRARTGQGKTLAFVLPILESLTNGPAKESRKTGY
GKAPSVLVLLPTRELAAQVAADFEVYGGALGLSCCVLYGGSSYGPQLNQLKRGVDIVVGT
PGRIKDHLESGNIDFRSLKFRVLDEADEMLRMGFVDDVELILGKVEDSSKVQTLLFSATL
PSWVKQISSKFLKPDKKTVDLVGNEKMKASTNVRHFVLPCTASARAQLIPDIISCYGSGG
RTIVFAETKDSVSTLSGVLPGARALHGDIQQSTREVTLKAFRSGKFSTLVATDVAARGLD
IDDVQLIIQCEPPRDVEAYIHRSGRTGRAGKSGVAVMLYDPRKSNFARIERESGVKFERI
SAPQPSDIAKSAGVEAAEKINEISDSVIPIFKAAAEELLNSSDLTPTDLLAKALANAAGY
TEIKSRSLLTSLENHVTVMLECGRPIFSPSYVYGTLRRFVPEDKVESIQGLSLTADGKGA
VFDVATEDLHTFLAGQGNAPGVSLQVVTLLPDLQEREPLRGRFGGGRGGFSGRRGGGRFS
GGGGRGSFSRGGGNRNSRW
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgttgctatcgccgaagctcaatccgccgacaagaagaagatcaagaagcac
tccggagttgcggagatggaggtggaggacaaccattcagctgagaaaaagctcaaaaag
gagaagaagtcgagcaaaaaggccaaattgactgacctcgacgattctaattctgacagc
cctgtcaaaattagtaaaaaggaaaagaagcgtaaggctttggaaatcgacgacaatgag
gaagggaggagtggaaacacttccgagaagaagatgaaatttgttgaggaggacgaaaaa
gaggataatcctaatgctgtatccaatttccgaatttcggcgccgcttagggaggctttg
aaggccaagggaattgaggcgcttttccagattcaggcaatgacgtttaataccattctt
gatggttccgatttggttggaagggcccgcactggtcaggggaaaacgttggcctttgtg
ttgcctatattagaatcattgacaaatggtcctgctaaagaatcaaggaagactggatat
ggaaaggcaccaagtgttcttgttctcttgcccacgagggagttggccgcacaggtggct
gccgactttgaagtttatggcggagctctagggttgagttgctgtgtcctgtatgggggg
tcttcttatggaccacagctgaatcaattgaaaagaggtgttgacattgttgttggcact
cctggtcgcattaaggatcacctagagagtggaaatattgactttcgatccttaaagttc
cgtgtgcttgatgaagctgatgaaatgctgaggatgggttttgttgatgatgttgaactc
attcttggcaaggttgaggattctagcaaggttcaaacgcttctttttagtgctactttg
ccgtcctgggtcaagcaaatatcttccaaatttttaaaaccagacaagaaaactgttgac
cttgttggtaatgagaaaatgaaagccagcaccaatgtaaggcattttgtccttccctgc
actgcatctgccagagctcagctcattcctgatatcattagctgttatggcagtggagga
cgcactattgtttttgcagagacaaaggattctgtttccacactatctggtgtgcttccc
ggagcacgtgcgttgcatggtgacatacaacagtctacccgtgaggtaactcttaaagcg
ttcagatcaggcaaattttctacgcttgtggctacagatgtagcagcacgagggttagac
attgatgatgtccagttaattattcagtgtgagcctcctcgtgatgtagaggcatacatt
catcggtctggaagaacaggaagagctgggaaaagtggtgtcgctgtgatgctttatgat
cctaggaagtctaattttgccagaatagaaagagaatcaggtgtgaaattcgaacgtata
agtgctccacagccatctgatatagctaaatcagctggtgttgaagctgctgaaaaaatc
aatgagatttctgacagtgtgattccgatattcaaagctgctgccgaagaactactcaac
tcttctgatttaaccccaacagaccttcttgctaaagctttggccaatgctgccggttat
actgaaatcaagagtcgatcacttctcacctcattggagaaccatgttactgtaatgctc
gagtgtggaaggcccattttctcaccttcgtatgtttatggaacgctgaggaggtttgta
cctgaagataaggttgaatctattcagggtctttctttgactgcagatgggaagggtgct
gtattcgatgtagctaccgaagatctccatacattccttgcagggcaggggaatgcgccc
ggtgtgagcttgcaagtggtgacgttattgccagatttgcaagaaagagagccgttaaga
ggaagatttggtggtggccgtggtggtttctcggggaggagaggaggtggcaggttttct
ggtggtggtggaagaggatcattttctagaggtggtggcaatagaaacagtagatggtga
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