Salvia splendens (scarlet sage): 121804888
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Entry
121804888 CDS
T07627
Name
(RefSeq) transcription factor IIIB 60 kDa subunit-like isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121804888
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
121804888
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
LTI65_LTI78_N
Motif
Other DBs
NCBI-GeneID:
121804888
NCBI-ProteinID:
XP_042060520
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Position
5:complement(17106507..17116981)
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AA seq
608 aa
AA seq
DB search
MVRIWCPFCAVNVRTDTAEGKTCCSLCGRVLSEDNFTEEVQFTKSSDGQARMQGRFVASV
QSHSESRERTLNEAYNGINDIMYALEIDGGDYIASAALRLYKLALDKNFTKGRRKEQVQA
SCLYIVCRAKDKPFLLIDFSEHLRINVYVLGAVFLQLCKVLSLEETGLLQKLVDPSLFIH
RFADRLFRSKDQRISKSALQIVASMKRDWMQSGRKPSGICGAALYISALAHGLNCSKSDV
IKTVHICEATLTKRMIEFENTESGGLTIEEFEKKSEELAALENNVEDKLQMKSRNGELLC
SHKGDGKPQFAYGLCKDCYKEFMALSGGLNGGSEPPAFQHAERKRIMAEEAVADRSENLD
SSALLGLTETNSKHLNYDGQRSLKNTQDGATQPADPDLTGATLKPKTMHGTIDGRTDASD
FTLEESESLSDIDDFEVDVYINTEEEKNLKTTVWEEINREYLEEQKAKEAAAVVAKKAYE
ASFANCSGDVEGARKLAEAAAAAAAQIRREKRQKRAADLKNPGPPETAKDAFKQMLNGKP
WSSKIRYELLEQLIDSDEQSPKKSRNETEAEAETKAESDHGDDYVEEDPEVDGAEVRKNI
VMAKILTI
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggatatggtgtcctttctgtgccgtcaacgttcggactgataccgctgaagga
aaaacttgctgttcactttgtggaagggttctatctgaagacaacttcacagaggaagtt
cagtttacgaaatcatctgatggacaggcacgcatgcaaggtcgttttgtggcgtctgtc
caatctcattcagagagtcgtgagaggacattgaatgaagcttacaatggaataaatgat
ataatgtatgccttggaaattgacggtggtgattatatagctagtgcagcattacggtta
tataagttggcactagataagaacttcacaaaggggcgcaggaaagaacaagtgcaagct
tcttgtctttatattgtctgtagggctaaagataagccatttcttcttattgatttctca
gaacatctaaggataaatgtctatgtgctaggggcagtctttttgcagctctgcaaagtt
cttagccttgaagaaactggtcttttgcaaaagcttgtggatcccagccttttcattcac
cgatttgctgatcgtctatttagaagcaaggaccaacgtatttccaaaagtgcacttcag
attgtggctagcatgaagcgtgattggatgcagagtggaaggaaaccaagtgggatatgt
ggagctgcactttatatatctgctctagcacatggtcttaattgttccaaatctgatgtt
ataaagacggtccacatatgtgaagcaacattgacaaagcggatgattgaatttgagaat
accgagtcaggaggtctaacgattgaggagtttgagaagaagtcagaggaacttgctgct
ctggaaaataatgttgaagacaaattacaaatgaagtctaggaatggtgagcttctatgt
agtcataagggtgatgggaaacctcagtttgcttatggtctttgtaaggactgctacaag
gagttcatggcactttctggaggccttaatggtggatcagagcccccagctttccagcat
gctgagaggaaaagaataatggccgaggaagctgttgctgatagatctgagaacctagat
tcatcagcattgcttggactgactgagaccaacagcaaacatttaaattatgatggacaa
aggagcctcaagaatactcaagatggagctacacagccagcagatcctgatttaacagga
gccaccttgaaaccgaaaaccatgcatggtactattgatggcagaacggatgctagtgat
tttactttggaagagtcagagagtttatcggacattgatgactttgaggtggatgtgtat
attaatactgaggaggagaagaatttgaaaacgactgtatgggaggagattaacagagaa
tatctcgaggagcagaaagcaaaagaagctgctgcagtagttgcaaagaaagcttatgaa
gccagttttgctaactgctcaggtgatgttgaaggcgcaagaaagctcgctgaggcagct
gcagcagcagctgcacagattagaagggaaaaacgacagaagcgagctgctgatttgaaa
aatcccgggcctcctgaaactgctaaagacgcatttaaacaaatgttaaatgggaagcca
tggagttctaaaattcgatatgagttactggagcagcttattgattcggatgagcagagc
cccaagaagagccggaatgagacagaggctgaggcagagacgaaagcagaatcggatcat
ggagacgattatgtggaagaagatcctgaagtagatggcgcagaagtacggaagaatata
gttatggccaagatattaacgatttga
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