Salvia splendens (scarlet sage): 121805089
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Entry
121805089 CDS
T07627
Name
(RefSeq) protein JOKA2-like
KO
K17987
next to BRCA1 gene 1 protein
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121805089
03029 Mitochondrial biogenesis [BR:
sspl03029
]
121805089
Membrane trafficking [BR:
sspl04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
121805089
Pexophagy
Other pexophagy associated proteins
121805089
Aggrephagy
Cargo receptors
121805089
Xenophagy
121805089
Other autophagy associated proteins
Midbophagy
121805089
Mitochondrial biogenesis [BR:
sspl03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
121805089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_NBR1_C
N_BRCA1_IG
PB1
ZZ
UBAP-1_UBA2
DUF4853
CLIP
Motif
Other DBs
NCBI-GeneID:
121805089
NCBI-ProteinID:
XP_042060802
LinkDB
All DBs
Position
5:complement(22645474..22649762)
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AA seq
828 aa
AA seq
DB search
MEAPSTVVIKVKYGDILRRFNAPIDDKLTVNMDVLRGKILSLFSFSPDTELMLSYVDEDG
DVVALVDDDDLRDVVKQGLNPVRVTVKVNRDKIDSPTYPNLSSTPLRSAPVHPLPNLSAG
VSEVMRNVPEPLREALVKLSEELASKATSTSPGICDMVENLSKVSLSYLGQRSVPAAMSN
MRNAVPESSSAADNKYAEDVTVSATVEKPKTYASTEKKDVKIKNVTGPRKDCPTFDFNAV
AAALESENSSGKPESDGVPFTIRGREKVRLSGECSNGKSNLTSNPPSVAINVGKAAEVGP
NLHYQFEKAAEFGPNPRDQCDIFSDRLNGPGNVRSSIIDDFKKETSPYKSEGLGSLCGFG
GMNACPFSGTPLENISAVPPLSPSEANLFRRSHCQNDTGGNIVHRGVCCDGCGVHPIVGP
RFKSKVKVNYDLCRVCYDKMGNGNDYVRMETPVVYRHHLPHFRVRDQGVFPHVYRGSKVK
LSSVKLDSRFIQDVNIFDGTVMAPFTPFTKIWRMRNNGRVAWPPKTQLVWIGGDKLTDTL
STEVQVLAAGLQVDQELDVTIDFISPELPGRYISYWRMASPSGQKFGQRVWVLIQVDASI
VKESPRDAVRNLNLNLPPASSYLNGLETISVDCEAVAEASRQKADNLKNTENELKFPIND
SLLVGNGAGWNSPPFPASSSVAYPIIDLTDMEPPVPSDMELPVLPASPAMYIPMLPPPPP
PPPAVPIAVVPESVELPEKHLMEDKLLKELAEMGFKQVDLNKEVLRMNEYDLEQAVDDLC
GVAEWDPILEELEEMGFRNTEMNKKLLKKNNGSIKRVVMDLIAGEEDV
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggaggctccgtctactgtggtgatcaaggtcaagtatggggatattcttaggcgtttc
aatgctcccattgatgacaaacttactgtgaacatggatgtgctgagagggaagatcctc
tccctcttcagcttttctcctgataccgagctcatgctttcgtatgttgatgaagatggg
gatgttgttgctcttgttgatgatgatgatcttcgtgacgtcgtgaaacagggccttaat
cccgtaagagtaactgtgaaagtgaatagggataaaattgacagtccaacttatcctaac
cttagttccacacctctaaggtctgctcctgtgcaccctctacccaatctgagtgctggt
gtgtctgaggttatgaggaatgtccctgagcctctgcgtgaagcacttgtgaaactttct
gaagagttggcatctaaggctacatccacttctcctggtatctgtgacatggttgaaaac
ctgtcaaaagtcagcttatcttatttgggccagcgatcggtccctgctgcgatgtctaat
atgcggaatgctgttcctgagagtagctcagctgcagataacaaatatgctgaagacgtc
acggtttctgccacagtggaaaagcctaagacatatgctagcactgaaaagaaggatgtc
aaaattaaaaatgttactgggccgaggaaggattgtccaacttttgactttaatgctgtg
gctgcagcccttgaatctgagaattccagtggcaagcctgaatcagatggtgttcccttt
actattcgtggcagagaaaaagtcaggttgagtggtgaatgttctaatggaaagtcgaac
ctgacgagtaaccctccatctgttgcaattaatgtcggcaaggctgcagaagttggtccg
aatctccattatcagtttgaaaaggctgcagaatttggaccgaacccgcgtgatcagtgt
gatattttctctgatcgcttgaatggccccggaaatgtgagatcttccataattgatgat
ttcaagaaggaaacatctccttacaaaagtgaagggttgggctcactttgtggttttggt
ggcatgaatgcatgcccattttctggtacaccactggaaaatatctcagctgttccacca
ctttctccttctgaggcaaatctctttaggagaagtcattgtcaaaatgatactggtggg
aatatcgtccatcggggggtttgttgtgatggttgtggcgtccaccctatagttggcccc
agattcaagtctaaagtgaaggtgaattatgacttgtgccgtgtatgctatgacaaaatg
gggaatggcaatgattatgtcagaatggaaaccccagtagtttatcgacatcatttgcca
cattttcgggttagggaccagggtgtgttccctcatgtttacagaggttctaaggtcaaa
ctaagttcggtgaagctagatagtcgcttcattcaagatgttaacatatttgatggtact
gttatggcacctttcactccatttaccaagatatggcggatgaggaacaatggtagagtt
gcatggcccccaaaaacacaacttgtttggattggaggtgataaattgactgataccctt
tctactgaagttcaagttcttgctgctggattgcaagtagaccaggagcttgatgtcacc
attgatttcatctctccagagcttccagggcgctatatctcatattggagaatggcctcg
ccatctggccaaaagtttggacagcgggtttgggttttaatccaggttgatgcttctatt
gttaaagaatcgcctcgtgatgctgtaagaaatttgaaccttaacttgcccccggcaagc
agctacttgaatggtcttgaaactattagcgtggattgtgaagcagtagcagaggccagt
cgtcagaaggctgataacttgaaaaacacagaaaatgagctgaaattccctattaatgat
agcttgttggttggcaatggagctggatggaactctcctccctttcctgcttcttcgtca
gttgcatatcctatcattgacctgactgatatggaaccacctgtcccttctgatatggaa
ctacctgtcctcccggcatctcctgctatgtacatccccatgctgccgccgccaccacca
ccacctcctgcagtacccattgccgttgtacccgaatctgttgaacttcccgaaaagcat
ctaatggaggataaacttctgaaggaactcgctgaaatgggcttcaaacaggttgatcta
aacaaggaagtcttgaggatgaacgagtatgatctcgagcaagcagtggatgatctctgt
ggtgtggctgagtgggatcccatcctcgaagagctcgaagagatgggttttcgtaacaca
gaaatgaacaagaagttgctgaagaagaataatgggagcatcaagcgcgtcgtcatggac
cttatcgctggagaggaggatgtttag
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