Salvia splendens (scarlet sage): 121805383
Help
Entry
121805383 CDS
T07627
Name
(RefSeq) DNA polymerase alpha catalytic subunit-like
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121805383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121805383
Enzymes [BR:
sspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121805383
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
121805383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
121805383
NCBI-ProteinID:
XP_042061142
LinkDB
All DBs
Position
5:31398208..31408825
Genome browser
AA seq
1540 aa
AA seq
DB search
MSDEEPSVSGRRRARGAVASARSEALERLKALRRGGRRDQDAAGFQIKMEQPIYDTVDED
EYEALVAKRREESKGFIVDDNGLGYGDEGQEEDWSIAGAALSSEESEGESERSKKKKSKK
ALNSDKEAAKKPSPLASAAALMGKQRISNMFTSSVFKKDIQKNVSCDSIVDDLIAEFAPD
ESDRERRRRANSTNLGSNKSSNMPVKIEKPSVSSYTGTIKEFHETSTGLGDVDFDPSEKC
NSIIDEGSSPIDAEKALDAADMMRNEGTEERIETVKNKLLVSDCEGEKVEKKVYSLNAKL
EEAKDPALSANVEWQALSAGIVDCKGTGTGLGGNQGSSEEKLDFEVESDGSLSFYILDAH
EEIYGANAGNVYLFGKVKSGGTYHSCCAVVRNMQRCVYAVPFVSLIHKDEIIEREKEVEE
SRKSTEKDLEESQAALRAQLHKLASDLKAEITKELLQRNVSTFRMALVKRNYAFERTDIP
HGENYFLKINYPFKDTPLPSDLKGNNFHALLGTHNSGLEMFLIKRKIKGPLWLSISKFSR
RTTSQRVSWCKFEVTIDFAKDIHVSTSSKTVSEIPPVVVTAINLKTIINEKQNVNEIVSA
SVICCHRAKIDTPMDISDWTRPGMLSRFTVVRKLDGGIFPMGFTKEAADRNTKARSNVIC
YESSERALLNRLMIELHTLDSDVLVGHNISGFDLDVLLHRVQACRVPSNMWSKIGRLKRS
AMPKLQKKGSSVFGSGASPGIMSCIAGRLLCDTYICSRDLLKEVSYSLSQLAKTQLDKVR
KEINPHDIPKMFQSSGSLMELIEYGETDAWLSMALMFHLSVLPLTRQLTNISGNLWHKTL
QGARAQRVEYLLLHSFHARKFIVPDKFSAQSKDTKTIKRKTSAGIESNENDPDDTNFDEA
PEDSHGKTKKGPSYSGGLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSPDG
SLPHLPSSNKIGVLPELLRNLVERRRMVKSWLKTATGPKVKQLDIQQQALKLTANSMYGC
LGFSNSRFYAKPLAELTTFQGREILQSTVDLVQNTLNLEVIYGDTDSIMIYSGLDDIGKA
KSIAGKVIQEVNKKYKCLEIDLDGLYKRMLLLKKKKYAAVKMQLKDGALVEVIERKGLDM
VRRDWSVLSKELGDFCLSQILSGGSCDDVVEVIHNSLMKIQEEMRNGQIPLEKYVITKTL
TKPPEAYPDSRSQPHVEVALRLKRSGYATGCSAGDAVPYVICCEQGTGSTSSVGIAQRAR
HPDELKKDNGNWIVDIDYYLAQQIHPVISRLCASIQGTSPARLADCLGLDSSKFQNKSID
SSSNDPSSLLSFVLDDEERYRGCEPLVLSCPSCSGTFGCSPILTSVCTYINTKPEDVQAG
SDNFWHKLCCPKCPEGDAGKITPANIANQVKRQAERFVSIYYKGLMMCDDETCNYTTRGV
NLRAQGDSERGTTCPNYPRCNGHLIRKYTEADLYRQLTYFCYTLDTVRCISKMEADKRLA
VEKEVARIRPLVEMAASTVEKMRDRCAYGWLQLKDFVVLV
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgaggagccatcagtatccggacggcgacgcgcacggggcgccgtcgcatcg
gcccgctcagaagcgctcgagcgtctcaaggcactccgccgcggcggccgccgcgatcag
gacgccgccggattccagatcaagatggagcagccgatctacgacaccgtcgatgaagac
gagtacgaggcattagtcgccaagcgccgcgaggaatccaagggtttcatcgtcgacgac
aacggcttagggtacggcgacgaaggccaggaggaggactggtcaattgccggcgccgcc
ttgtcctccgaagaatccgagggggaatcggagaggtcgaagaagaagaagagcaaaaag
gctctcaattcggataaggaagcggcgaagaaaccttctccgttggcctctgctgcggcg
ttgatgggtaagcagaggatttctaatatgttcacttcgtctgtgtttaagaaggatata
cagaagaatgtttcgtgtgatagcattgttgatgatttgattgcggagtttgcgcctgat
gagagtgatagggagaggagaaggagagccaattctaccaatttaggttcgaataaatcc
agtaatatgcctgtgaaaattgagaagccttctgtaagtagttacactggtacgattaag
gaatttcacgagactagcaccggcctcggtgatgtggattttgatccttctgaaaaatgt
aacagtatcatagatgagggtagtagccccattgatgccgagaaagcactggatgcagct
gatatgatgagaaatgagggaacggaggaaagaattgaaaccgtgaaaaataagttattg
gttagtgactgtgaaggggagaaggtagagaaaaaggtgtattctctcaatgcaaaactt
gaagaggcaaaggatccagctctgagtgctaatgtagagtggcaagcactaagtgctggt
attgttgattgcaaggggactgggactgggctcggagggaatcagggaagcagtgaggag
aaattggactttgaagtggagtccgatggatctttgtctttttatatacttgatgctcat
gaggagatctatggtgctaatgctgggaatgtttatctctttggaaaggtcaaatcagga
ggtacataccatagctgttgcgcagttgtgaggaatatgcagagatgcgtgtatgcagtc
ccgtttgtttctttaattcacaaggatgaaattattgagcgtgaaaaggaagttgaagag
tcacgaaaatccacagagaaagatctagaagagtctcaagccgctctacgagctcaacta
cataagttggcgtcagatctgaaggctgaaataacaaaggagttattgcaacggaatgtc
tcaacattcagaatggcgcttgtcaagagaaactatgcatttgaacgaacagacataccc
cacggagagaattattttctaaagatcaattatccgttcaaggataccccacttccatca
gatctcaaagggaacaacttccacgctttgcttggaactcataatagtgggctggaaatg
tttctaattaaaaggaaaataaagggaccattgtggctatcaatctcaaaattctcccgc
cgcacaacttctcaacgagtgagctggtgtaagtttgaggttactattgatttcgcaaag
gatattcacgtttcaacttcatcaaagactgtctcagagattcctccagtagtggttaca
gctataaatttgaaaactattatcaatgagaagcagaatgtaaatgaaattgtctctgca
tctgtcatttgttgccacagggctaagattgatactcctatggatatctcagactggacc
cgtccaggtatgcttagccgttttactgtcgtgcgcaaacttgacggaggcatatttcct
atgggttttactaaggaggcagctgacagaaatacaaaggcacggtcaaatgttatttgc
tatgagagcagtgaaagggctctattaaatcgtttgatgattgagttgcacacattagat
agtgatgttctagttgggcacaatatatctggatttgacctggatgttcttctccacaga
gttcaggcttgcagggttcccagcaacatgtggtctaaaataggccgtcttaaacgctct
gccatgcccaaacttcagaaaaaggggagttcagtattcggttcaggagcaagtccagga
atcatgtcctgcattgctgggcgtctcttatgtgatacatacatttgttcgcgggaccta
ttaaaagaggtgagctactccctgtcacaactagcaaaaacacagctagataaggtccgt
aaggaaattaatccacatgatatcccaaagatgtttcaaagttctggatcacttatggaa
cttattgagtacggggaaacagatgcatggttatcgatggcactcatgttccatctgagt
gttcttcccttgacacgtcaattgactaacattagtggaaatctttggcataaaactctt
cagggggcaagggctcaaagagtcgaatatcttttgctgcattcatttcatgccaggaag
tttattgttccagacaagttttctgctcaatccaaagatacgaagactataaagcgtaaa
actagtgctggcatcgagagcaatgagaatgatcctgatgacacaaattttgatgaggct
ccagaagattctcatggaaagaccaagaagggaccttcctattcaggtggattagtgctg
gagccaaagaaaggactctatgacaaatatatattacttctggatttcaacagtctctac
ccttctattattcaggaatacaatatttgctttactactgttgaaagatctcctgatgga
tcgcttccccacctgccctctagtaacaaaattggagtactaccagagttgcttaggaat
ttggtcgagagaagaagaatggtaaaatcatggttaaaaacagcaaccggtcccaaagtt
aaacaactcgacatacagcagcaagctctaaagctgactgccaacagcatgtacgggtgt
ctgggattctccaactcaagattctatgcaaaacccttagcagaactaacaacatttcaa
ggaagggagattttacagagcactgttgatcttgtacaaaatactctaaacttagaggtt
atttatggagacacggattcaattatgatatatagtggacttgatgatattggaaaagct
aaatcgatagcggggaaggtcattcaggaggtgaacaagaaatataagtgccttgagatt
gatcttgatggcttgtacaaaagaatgcttttgctcaagaagaagaaatatgcagccgtc
aaaatgcaattgaaggatggtgcattggttgaggtcattgagcgtaaaggtcttgatatg
gttcgccgtgactggagtgtgctgtctaaggaattaggagatttttgtctcagtcagata
ttatctggcggttcctgtgatgatgttgttgaagttatacacaactccctcatgaagata
caagaggaaatgaggaatggacaaataccactcgaaaaatatgtgatcacaaagacacta
accaaaccacctgaagcatatcctgattccagaagtcagcctcatgtagaggtagcactt
agactgaagagaagtggttacgcgactggttgttctgctggagatgctgtaccttatgtc
atttgctgtgagcagggaactggttctacttcgtcagttggaatcgcccagcgggcaaga
catcctgacgaactgaaaaaggacaatggaaactggatagttgacattgattattaccta
gcccagcagattcaccccgtaatatctcgtctatgtgcatcgattcaaggtacaagtcca
gcgcgtttggctgattgtttggggcttgactcatcaaagttccagaataaatcaattgat
tcttccagcaacgatccatccagcttgctatcatttgtattggatgatgaagagagatat
cgtggttgtgaacctttggttttatcgtgcccaagctgctcgggcacctttggatgctcg
ccaatattgacctcagtttgtacatatatcaataccaagccagaagatgtgcaagcagga
tctgataatttctggcacaaattgtgctgtccaaagtgcccagaaggagatgctgggaaa
ataactcctgccaacatagctaaccaggtgaaacgacaagccgaaagatttgtctcgata
tattacaagggcctgatgatgtgtgatgatgaaacttgcaactacactacacgcggtgtg
aaccttcgtgcacaaggggattccgagagaggaacgacttgtccaaactatcctcgctgt
aatggacacctcatcagaaagtacacggaagcagatctatatagacagctgacatacttt
tgctacacgttagacacggtgcgctgcattagcaagatggaggcggataagagattggcc
gtggagaaagaagtagcaagaatccggcctctggttgaaatggcagcgtcgacagttgag
aagatgcgcgatagatgcgcttacggatggcttcagctcaaagactttgttgttttagtt
tag
DBGET
integrated database retrieval system
