Salvia splendens (scarlet sage): 121805553
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Entry
121805553 CDS
T07627
Name
(RefSeq) protein GLE1-like isoform X1
KO
K18723
nucleoporin GLE1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03013
Nucleocytoplasmic transport
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121805553
03015 mRNA surveillance pathway
121805553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121805553
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121805553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
121805553
NCBI-ProteinID:
XP_042061385
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Position
5:complement(41028056..41034860)
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AA seq
622 aa
AA seq
DB search
MGFVELGLPCPRNVNGITADPQPDWSFDQLLSEINSIEKKLNSNLDFPSPFTKNEPRDLK
ASKDKRGFVMRVSDYETDYADADSDSEADADNSLVASGRRFACDELYMSDDSEDDVSLGM
QCHQLMDRAGLAEAAVYELNDEHRLNVTEAVRSKVYDLETELVKENEKFVSLTTTIHKNR
ELQQERVRKLDLQYQRTLAEDLDNHLTVVQRDHEHISQLEERRIRDDMARAEAKRREKAI
QEEKIRQERIKAEEEQARLKSEKAERDKAAALEAEIKAAEEAAAKQASASDAAPNAGKDS
KEAPGPSSSTFDVKKGTQSSAVKNIIRASQNALELEKRRQQIYEELSTKVNPLNQDYQSL
GRTIGRLIRTISATIENIRTRAEEIMKLISSPQYPQPISIKLFAEKIVSNCTNQRSPNAI
FASSRVVVLVTSKIPLAMDILVAELNRVCIYTVPKHISYSKEAFGTRDDYFKAIGYKEVD
GKLEGLDEYLERLSSYMKLYGALVQTEVGGCQNLHGMKEGWSWLARFLNTIPSNLFTAIA
LDSFLVMAGYGMYCRYRNQFEKLLSVIGRDFVNALQEGGGESRSAKVSKVKMSLRNYIES
KQYKKEPEGLQLRDRLDSNELY
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgttgaattagggcttccttgtccgcgaaatgtcaatgggatcacagctgat
ccacagcctgattggagtttcgaccagttactttcggagattaattcaatagaaaaaaag
ctcaattcaaatttggattttccttctccttttaccaaaaatgaacctagagatttgaaa
gcttcgaaggataaacggggctttgtaatgcgcgtgtccgattatgagactgactatgcg
gatgctgatagtgatagtgaggctgatgctgacaattcacttgtggcgtcaggcaggaga
tttgcctgtgatgaactttatatgagtgatgattctgaagatgatgtatctcttgggatg
caatgccaccaactgatggatagagccggattagctgaagctgcggtctatgagctaaat
gatgagcatcggcttaatgtaacggaggcagtgagatccaaagtatatgatctcgagact
gagctggtcaaggaaaatgagaaatttgtctctttgacaactacaattcacaaaaacaga
gaactacaacaggagagggtgagaaaattggacttgcagtatcaacgtacactggcagaa
gacctggataatcacttgacagttgtacagagggatcatgagcacatttcccaattagaa
gaaagaagaattagagatgatatggctcgtgcggaggctaaaagaagggaaaaggcaatc
caggaagaaaaaatacggcaagaaaggatcaaagcagaagaggagcaggctagactaaaa
tctgaaaaggctgagagggataaagcagcggctctagaggctgagataaaagctgccgaa
gaagctgcagccaaacaagcttctgcctcagatgctgctcctaatgcggggaaagattcc
aaggaagcccctgggccctccagttctacatttgatgtcaagaaaggaacccaatcatca
gcagtaaaaaacataattcgagcttcccaaaatgctcttgaattggaaaagagacggcaa
caaatttatgaagaattgtctacaaaagtcaatcctctaaatcaggattatcaaagcctt
gggcgaactataggccgactaattagaactatctcagctaccatagaaaatattaggaca
agggcagaagaaattatgaaactgattagtagtccacaatatccacagcccatcagtata
aaattatttgcagaaaagattgtctccaactgcacaaatcaaaggagcccgaatgcaata
tttgcttccagtcgggttgttgttcttgtgacatctaagatcccactagccatggacatt
ctcgttgctgagttgaacagagtttgcatctacacagttccgaagcacataagttactca
aaggaagcattcggaaccagagatgattacttcaaagctatcggttacaaggaagtagat
ggcaagcttgagggcctcgatgagtatttagaaaggttgagctcttatatgaaattatat
ggagctttagtgcagactgaagtcggaggctgccagaacctgcatggaatgaaggaaggt
tggtcatggctagcaagattcttgaatacaataccatcgaatctatttactgcaattgcc
ctcgattcatttcttgtgatggctggatacgggatgtactgccgatacagaaatcaattt
gagaagctattgagtgttattgggcgcgactttgtgaacgctttacaagaaggtggtggg
gagtcgaggagcgccaaggtgagcaaggtgaagatgtcgcttcggaattatatcgagtca
aagcagtacaagaaagaacccgaaggattgcaattgagagaccgtttggactcaaatgaa
ctgtactga
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