KEGG   Salvia splendens (scarlet sage): 121805608
Entry
121805608         CDS       T07627                                 
Name
(RefSeq) ras-related protein RABF2b-like
  KO
K07887  Ras-related protein Rab-5A
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl04144  Endocytosis
sspl04145  Phagosome
sspl04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121805608
   04145 Phagosome
    121805608
   04148 Efferocytosis
    121805608
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sspl04131]
    121805608
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sspl04147]
    121805608
   04031 GTP-binding proteins [BR:sspl04031]
    121805608
Membrane trafficking [BR:sspl04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    121805608
 Endosome - Lysosome transport
    121805608
Exosome [BR:sspl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121805608
  Exosomal proteins of other body fluids (saliva and urine)
   121805608
  Exosomal proteins of colorectal cancer cells
   121805608
  Exosomal proteins of bladder cancer cells
   121805608
GTP-binding proteins [BR:sspl04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    121805608
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_24 AAA_22 AAA_16 TsaE
Other DBs
NCBI-GeneID: 121805608
NCBI-ProteinID: XP_042061462
LinkDB
Position
5:complement(8372332..8388158)
AA seq 200 aa
MASSGNKSINAKLVLLGDVGAGKSSLVLRFVKGHFVEFQESTIGAAFFSQTVAVNDETVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDVTNQASFDRAKKWVEELKAQGNPNMVMAL
AGNKSDLLDAKKVEPEDAQTYAEVNGLFFMETSAKTATNVNDLFHEIAKRLPRLQPVPNP
SGMVHVDRTAERPASASCCS
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcttccagcggaaataagagcatcaacgccaaactggtgcttcttggagatgtagga
gctggaaaatctagtttagttttgcgttttgtgaaagggcacttcgttgagtttcaggag
tcgactataggtgctgcatttttttcacaaacagttgctgtgaatgatgaaactgtaaag
tttgaaatatgggacacggcaggtcaagaaagataccacagcttagctccgatgtattat
agaggagctgctgctgcgataattgtttatgatgtaacaaaccaagcatcctttgatcgg
gccaaaaaatgggtcgaggagctcaaagcacaaggcaacccaaatatggtcatggctctt
gctgggaataaatcagatctgttggatgcaaaaaaagtggaacccgaggacgcacaaacc
tatgcagaggtgaacggtcttttcttcatggagacatcagcgaagacagcaactaatgtc
aatgacctgtttcatgagatagcgaagagattgcctcgtctgcagccagtgccaaaccca
tcaggcatggtccatgtagatcgaacagcagagaggccagccagtgcttcgtgttgctct
taa

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