Salvia splendens (scarlet sage): 121805730
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Entry
121805730 CDS
T07627
Name
(RefSeq) RNA polymerase sigma factor sigA-like
KO
K03086
RNA polymerase primary sigma factor
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121805730
Transcription machinery [BR:
sspl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
121805730
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
HTH_36
Motif
Other DBs
NCBI-GeneID:
121805730
NCBI-ProteinID:
XP_042061638
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Position
5:complement(33479975..33482378)
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AA seq
451 aa
AA seq
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MIMATAVVGLHTATGKSLLRLGATSYYSDLSAERLNCSTDPSTTTSSSSSINFISSSGDK
SRSRRRPHSIKALRDPHPCLSDPDHLVDAVLLLQKSMLEKQWNLAPKTEVTCSGTSARRR
RLESTKRVEKPIMNPELLRRGYVKSDQLLTHAQVVQLSHKIKAGLALEERRARLKQRLGC
EPSDEQLAASLRMSRANLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMPDLIQA
GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVESSRTLRLPTHLHERLTLIRNAK
ARLEERGVTPSVDRIAESLNMTERKVRNATEAVSKVFSLDREAYPSLNGLPGETLHSYIA
DTHIENNPWTGVDEWALKDEVDKLISVTLREREQDIIRLYYGLDNECLTWEDISRRIGLS
RERVRQVGLVALEKLKHAARKSGLETMLVQH
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggccactgccgtcgtcggactgcacaccgccaccggaaaaagcctcctccgc
ctcggcgctacctcctactactccgatctctccgccgaaaggctcaattgctccacagat
ccctccaccaccacctcctcttcctcctccatcaatttcatctcctcctccggcgataaa
tcgcgctcacgacgccgcccgcactccatcaaagccctaagagatcctcacccctgcctc
tccgatccagatcatctcgtcgatgcggtgcttctactgcagaaatctatgctcgagaag
caatggaatctcgcccctaaaactgaggtcacttgttccggaacatccgcccgccgccgc
aggctggaatccacgaagagagttgagaagccgattatgaatcccgagcttcttcgcaga
ggctatgtcaagagcgaccagctcctcactcatgcccaagtcgttcagctctcgcacaaa
atcaaagccggccttgccttggaagagcggagggccaggctgaagcagagattaggctgc
gagccctcggatgagcagcttgcggcctccctgagaatgagccgtgctaatctgcagtcg
aagatgattgagtgctcgctggccagagagaagctggcgatgagcaatatccggctcgtc
atgtctattgctcaacgatacgacaacatgggtgctgaaatgcctgatcttattcaggcc
ggactcattggattgctacgcgggattgagaagtttgattcctcaaagggattcaagatc
tctacctacgtgtattggtggataagacagggtgtttcgagagctttagtcgagagctct
agaaccctaaggctgccaacgcatttacacgaaaggctaactttgatcagaaatgcaaag
gctaggcttgaagaaagaggagtaactccatctgttgatagaattgctgagagtctcaac
atgactgagaggaaagtgaggaatgctactgaggcagtcagcaaggttttctctcttgac
agagaagcatacccctctttaaatggtcttcctggtgaaactcttcatagctacattgca
gatactcacatcgagaataacccatggactggagtcgatgagtgggcacttaaggatgaa
gtagataaacttattagtgtgacgttgcgagaaagggaacaggatattatccgtctatac
tatggcctagataatgaatgcctcacttgggaagacattagcagacgcataggtttgtcg
agagagagagtaaggcaggttgggctcgtggcgctggagaaattaaaacatgctgccagg
aaaagcggattggagacaatgttggtgcaacactga
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