Salvia splendens (scarlet sage): 121805785
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Entry
121805785 CDS
T07627
Name
(RefSeq) replication protein A 32 kDa subunit A-like isoform X1
KO
K10739
replication factor A2
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03030
DNA replication
sspl03420
Nucleotide excision repair
sspl03430
Mismatch repair
sspl03440
Homologous recombination
sspl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121805785
03420 Nucleotide excision repair
121805785
03430 Mismatch repair
121805785
03440 Homologous recombination
121805785
03460 Fanconi anemia pathway
121805785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121805785
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121805785
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
121805785
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
121805785
MMR (mismatch excision repair)
121805785
DSBR (double strand breaks repair)
HR (homologous recombination)
121805785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
HTH_27
TrmB
HTH_24
GntR
tRNA_anti_2
NirdL-like_HTH
z-alpha
Motif
Other DBs
NCBI-GeneID:
121805785
NCBI-ProteinID:
XP_042061716
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All DBs
Position
5:complement(14699732..14703643)
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AA seq
281 aa
AA seq
DB search
MYGNSEFDGSAAFSGGGFMPSQATQTADPSFSPAKNRDAQGLLPLTVKQIREAFQASDDK
ANFLIDGVSVNNVKLVGLVFEKTERVTDVSFTLDDGTGRIDCHRWVQEVVDTKEMELLSN
GTYVKVHGHLKGFQGKKQLIVYSVRSVTDYNEIPNHFAECIYVHCYNTRTRKMQDAPQVT
GQMPNLSVNTPSKGYQPTSSNHLQFSAQHNVDAIRGIDKLVLNYMQQPSCIGKESGVHRA
ELARQLNVPEHKILEAIASLESEGLVYSTVDEFHYKSTANG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtacggaaacagcgaatttgacggcagcgctgccttctccggtggcggcttcatgcct
tctcaggctacccaaactgccgatccctccttctctccggccaagaatcgtgacgcacaa
ggtttacttccactgacggtgaagcaaataagagaagcttttcaagcgagtgatgataag
gcaaattttttgattgatggagtatcagtgaacaacgtgaaattggttggattggtgttt
gagaaaactgaaagggtgactgatgtttctttcacacttgatgatggaactggccgaatc
gactgccatagatgggtacaagaagttgttgatacaaaggaaatggagctactatcaaat
ggcacatatgttaaggttcatgggcatttgaagggctttcaagggaaaaaacaattgatt
gtttactctgtgaggagtgtcacggactataatgagattccaaaccactttgctgagtgc
atatatgtccattgctacaacactagaacacggaagatgcaggatgctccccaagttaca
ggtcaaatgccaaatctatctgttaacaccccttcaaagggttaccaacctacttcatca
aatcatttgcagttttcggcacaacataatgtggatgcaatcaggggcattgataaactt
gtcttgaactatatgcaacagccatcatgcattggcaaagaaagtggagtccatcgtgct
gaacttgccaggcaactaaatgttcccgagcataagatcttagaagctattgcatctttg
gaatcagaaggtctagtttattcaacggttgatgagttccactataagtccactgccaac
ggttga
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