Salvia splendens (scarlet sage): 121805813
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Entry
121805813 CDS
T07627
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
121805813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121805813
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121805813
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
121805813
NCBI-ProteinID:
XP_042061759
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Position
1:complement(321373..324299)
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AA seq
582 aa
AA seq
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MAYSFPEEVLEHVFSFLSSDRDRNAVSLVCKSWYDIERWCRRRIFVGNCYAVSPEIVIRR
FPELRAVEMKGKPHFADFNLVPEGWGAYAYPWIAAMEEAYPFLEEIKLKRMVVTDESLEL
ISKSYKSFKVLVLTSCEGFTTDGLASIAANCRHLRELDLRESEVEDLSGHWLSHFPDSCT
SLVSLNMSCLGSEVSFCALERLVARSPNLRTLRLNRAVPLERLANLIRRAPQLVELGTGA
YSAEIRSDTFSNLADAFSACKQLKALSGFWDVVPSYLPAMYSVCSGITSLNLSYAAIPSS
DLVKLISQCQNLQRLWVLDYIEDSGLDALAASCKDLQELRVFPSDPFGAEPNVSLTEQGL
VSVSEGCPKLESVLYFCRQMSNAALIAIAKNRPNFIRFRLCIIDPQAPDYLTLEPLDAGF
GAIVEKCKELRRLSMTGLLTDRVFKYIGSHAKKLEMLSIAFAGDSDLGLHHVLSGCDSLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLAQKMPRLNVEVIDERGPP
DSRPEGCSVERAYVYRTVASRQRLDMPDFVWTHDEDSSLRYS
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcgttcccggaggaagttctggagcacgtgttctccttcctgagctccgac
agggaccggaacgccgtctccttagtttgcaaatcctggtacgatattgagcggtggtgc
cgccgccgcatattcgttgggaactgctacgccgtctcgccagagatcgtgatccggcgg
ttcccggagctgagggcggtggagatgaaggggaagccgcatttcgctgatttcaacctc
gtgccggagggctggggcgcttacgcctacccgtggatcgcggccatggaggaggcgtat
ccgttcctggaggagatcaagctgaagcgcatggtggtgacggacgagagcttggagctg
atctccaagtcttataagagtttcaaagttctggtgctgacgtcatgcgagggtttcacc
acggatggtctcgcgtcgattgcagctaattgcaggcatttgagggaactagatttgagg
gagagtgaagtggaggacctgagtgggcattggcttagccattttcccgatagctgcact
tctttggtgtcgcttaacatgtcttgtctgggttctgaggtaagtttctgcgccttggag
cgactggttgcacgttcccctaaccttaggactcttcggctgaaccgtgctgtgcccctt
gagaggcttgctaacctgattcggcgtgctccccaattggttgaattaggtaccggtgcc
tattcagctgaaattcgatctgatacattttcaaatctggctgacgcattttcagcctgt
aagcaacttaaggctttgtctggtttttgggatgtggttccttcttatcttccagccatg
tattctgtctgttctggaatcacttcgctgaatttaagttatgctgccattccgagttct
gatcttgttaagcttattagccaatgccagaatttgcagcgtttatgggtgttggactac
atcgaagacagtggattggatgctcttgctgcatcttgcaaggatctgcaagaacttagg
gtgttcccttctgatccttttggagcagaaccaaatgtgtctttgacagaacaagggctt
gtgtctgtctctgaaggctgccccaagcttgaatctgttctttacttttgccgccagatg
tcaaatgctgcactgattgctattgcaaagaatcggcctaattttatccggttccgcctc
tgtatcattgatcctcaagcacccgactacttaaccctcgaaccacttgatgctggtttt
ggagcgattgtggagaagtgtaaagaattgcgccggctttccatgaccggcctcctcact
gaccgcgtgttcaaatacattggatcacacgccaagaagttggagatgctttcaatagcc
ttcgcaggggatagtgacttgggcctccatcacgtgttgtctggctgcgacagcctccgg
aaactagagatcagggactgcccatttggggacaaggctctcttggccaatgctgcaaag
ctagagacgatgcgatccctttggatgtcttcttgttctgtgagttttggagcttgtaag
ctgctggcacagaagatgcctaggctcaacgttgaagtcatagacgagagaggcccacct
gattcaaggcctgaaggctgctctgttgagagagcctatgtgtatcgcactgtcgctagc
aggcagaggcttgacatgcctgactttgtgtggactcatgatgaggattcatccttgagg
tattcctaa
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