Salvia splendens (scarlet sage): 121805994
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Entry
121805994 CDS
T07627
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121805994
Transcription machinery [BR:
sspl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
121805994
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
121805994
NCBI-ProteinID:
XP_042061992
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Position
5:complement(42996911..43000403)
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AA seq
521 aa
AA seq
DB search
MFGADSFGMGFVSVSSSAARTPLEVGVKYLPRESLSRRPIVLSFRKGENKKLALITPREP
VALPLETNKGNHKRLRKGKKRPERVNVALTDQASPSTSDLYYNEAAAKLEYIFNQSPTEA
VVVDEVKDCRITRRQSRRIRTGETVETEKKTVVRNQKKKESRLTLEKRIALKTKKAGESV
ASSEKIKHRNQDEFEKTNRLVRDYSASSDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMK
EILQVKESAQKDLGKELTEGELANATNMSTVQMRKQLEVGRAARNKLIKHNLRLVLFVMN
KYFQDFASWPRFQDLCQAGVKGLITGIDRFEPKRKFQLSTYSLFWIRHAIIRSMTLSSFT
KVSFGLESIRADIHRTKLVLSFELQRLPTKEEIIDRVGISAERYHEVMRAAKPILSLHAK
HAVTQEELINGIKDVDGVEGDQRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDR
TLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLHRYSF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagctgacagttttggcatgggatttgtgtctgtttcgagttctgctgcacga
actcctttggaagtaggcgtcaaatatttgcctcgtgaatcgttatctagaagaccaatt
gtattatcatttcgaaagggtgaaaataagaagttagctctaattacgcctagggaacct
gtagctttgcctttggagacaaataaaggaaaccataagagattaagaaaggggaaaaag
cggccagaacgagtaaatgtggctttaactgaccaagcatctccgagtacatcagatttg
tattacaatgaagccgctgcaaagctggagtatatatttaatcaaagccctacagaggct
gtcgttgttgatgaggtgaaagattgtaggataacgagaaggcagtcacgaaggataagg
actggagaaaccgtggagacggagaaaaaaactgttgtaaggaatcaaaagaagaaggag
agtaggttaactcttgagaagaggattgctctcaagacgaagaaagcaggtgaatccgtt
gcgtcatctgagaaaataaaacacagaaaccaggacgaattcgagaagactaataggctt
gttagggactattcagcttcctctgacttggttagcttagattggaagaaaatgaagatc
cctccggttcttccttcgtctgagcatgcctggctgtttaagctgatgcaacctatgaag
gaaatcctccaagtaaaggaaagtgcacagaaggatttaggaaaagagctaactgaaggt
gagttagcaaatgcaacaaatatgagtactgttcagatgaggaaacaattagaggttggt
cgagctgccagaaacaagttgatcaagcacaacctgcgacttgtcttgttcgtcatgaat
aagtattttcaagacttcgctagttggccacggttccaagacttgtgtcaagctggtgta
aagggtctcataacgggtattgaccgctttgagccaaaacggaagttccaactctcaacg
tatagcctcttttggattaggcatgccattattcgttccatgacgctctcaagtttcaca
aaggtgtcttttggccttgagtcgatccgagctgatattcacagaaccaagctagtgttg
tcgttcgaacttcaaagattgccaactaaagaagaaattatagatcgagttgggatctcc
gcagaaagataccatgaagtaatgagggcagcaaagcctattctttcattgcatgcaaag
catgcagtgacccaggaagagctcatcaatggaatcaaagacgtagatggtgtcgaggga
gatcaaagaaggcaacctgcgcttctcaggcttgctctagacgacgtgctcgattctctg
aagccgaaggagagtttagtgatcagacaacggtacgggcttgatggtaaaggagataga
acactaggagagattgcaggaaatctcaacatttctcgggaaatggttaggaagcatgaa
gtgaaggctctcatgaagctcaagcatccagctcgagtcgattaccttcaccgctacagt
ttctaa
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