Salvia splendens (scarlet sage): 121806315
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Entry
121806315 CDS
T07627
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121806315
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121806315
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121806315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_3
AF_0924
zf-ANAPC11
Prok-RING_4
zf-RING_16
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
121806315
NCBI-ProteinID:
XP_042062245
LinkDB
All DBs
Position
6:33328648..33331786
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AA seq
425 aa
AA seq
DB search
MNFGKIIRKNQFFFQERIRAADFGRIQRKDWKIAKVKRRMLNLWVFLCCISYFMVFFAAA
GNVVMIAKNVTFSFDDIEANFAPSVRESGICGTVSIAEPLDACSLLTNEIVSSMNGTRYP
FVLIIRGGCSFEDKIRRAQAAGFEAAIVYDNGTSDLVAMAGNPVGININAVFISKVSGET
LARYAGTADLQLWIVPSYENPSWSMIALSFISLLGVSAVLATCFFVRRHRFRSERPLAPR
VREFHGISSRLVKAMPSLIFTAVLEDNCTSQTCAICLEDYSVGEKLRVLPCQHKFHAACV
DTWLTSWRTFCPVCKRDAKTKTMKPPASESTPLLPAPLSPSSASSPESSSPMQIGPSVSL
IYNLHSHQPPQSDTPPLQPDGACAVASNPTTYTSLSTLSSIYVLPYVPAAGNVSSTYFGS
SSHVS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgggaaaataataagaaagaatcaatttttctttcaagagagaattagggct
gcggattttggaagaatccaaagaaaagattggaaaattgccaaggttaaaaggaggatg
ttgaatttgtgggtatttttgtgctgcatttcctatttcatggtttttttcgcagctgct
ggaaatgtggtcatgattgcaaagaatgtaactttttctttcgacgacattgaagctaac
tttgcaccgtcggtgagagagtctggaatatgtgggacagtgagcattgcagagcctttg
gatgcttgctcattgctgaccaacgaaatagtttcaagtatgaatggcaccagatatcca
ttcgtgttgataatcagaggtggatgtagctttgaggacaaaattagacgagcacaagct
gctggatttgaagcagccattgtctatgacaacggaaccagcgatttagttgcaatggct
ggaaatcccgttggtataaatatcaatgcagtgtttatctcgaaagtttccggggaaaca
cttgctagatatgctggtacagctgatttgcagctgtggattgtcccgagctatgagaat
ccgtcttggtctatgatagctctgtcattcatctctttactcggtgtctcagccgtgtta
gctacttgcttcttcgtgagaaggcaccggttcagaagtgaaaggccgctagcaccccgt
gtgagagagttccacggaataagcagtcgtctggtgaaggcaatgcccagcctgatcttc
acagctgttcttgaggacaactgtacctctcaaacgtgcgctatatgtctcgaagactac
agtgtcggagaaaagctcagagtccttccatgtcaacacaaattccatgctgcctgtgtc
gacacctggttaacgtcgtggagaaccttctgccccgtctgcaagcgagatgcaaaaaca
aaaaccatgaagcctccagcgtcagagtccacaccattgctaccagctcccctttctcca
tcttcggcttcttcaccggagtcatcatcgcctatgcagatagggccatcagtttcactc
atctacaacctgcattctcatcaaccgccccagagtgatacacctcctctccaacccgat
ggtgcttgtgcagtggcgtctaacccaaccacctacacatcgttgtcgactctcagttcc
atatacgtcctgccctatgttccggctgcaggtaatgtttcatcgacctactttggctct
tcaagtcacgtgtcgtag
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