Salvia splendens (scarlet sage): 121806349
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Entry
121806349 CDS
T07627
Name
(RefSeq) zinc finger CCCH domain-containing protein 64-like
KO
K24939
CWF19-like protein 1
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121806349
Spliceosome [BR:
sspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121806349
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf-CCCH_DUS3L
zf_CCCH_4
zf-CCCH_4
Torus
zf-CCCH
zf-CCCH_3
zf-CCCH_12
zf-CCCH_9
zf-CCCH_RBM22
HIT
Motif
Other DBs
NCBI-GeneID:
121806349
NCBI-ProteinID:
XP_042062291
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All DBs
Position
6:complement(13242714..13254928)
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AA seq
606 aa
AA seq
DB search
MAAAPRILLCGDARGRLAQLFKRVSSVNKSAGPFDALLCVGQFFPDAPEQLEEFNDYVEG
RSKIPIPTYFIGDYGIAAPKTLGAVAKDSANLGFKMDGLKVCENLYWLRGSGKFLLHGLS
VAYLSGRQSANSQQFGTYSQDDIDSLRALIEEPGIVDVFLTNEWPIGVTNGVVSSGIPSG
MDLSIGDSNISELVAEIKPRYHIAGSAGVYYDREPYANIGAVHVTRFIALAPVGNKDKQK
FIHALSPTPASKMSASELCTKPPNTTLSPYSLEKEIGSGNGATKRSGESVSDSQYWRYDV
SKRLKHGDGAGDRLCFKFVSSGSCQRGDKCHFRHDEDAREQSLRGVCFEFLNKGKCERGP
DCTYKHELQEEGKALSGKRSGSGTGSSNRSKECWFCLSSPNLESHLITSVGEHCYCALAK
GPLVQDHVLIIPIEHLPNTLFLPPECEKDLSKLRGSLQACFKRQGKEVVFFEWVSKRGTH
ANLQVVPIPSSKASSVEQIFNLAAKKLGFTFATLKNDNYMEARKSLGMHLNRNQSLFYVE
VPGGTILSHAVEENENFPFQFGREVLAGLLNMADKADWRNCQLSKDEEAEMAEKFKRQFK
EYDPNS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagctccccgcattcttctctgcggcgatgcccgcggccgcctcgcccagctc
ttcaaacgcgtttcctccgtgaacaaatcagcagggccgttcgacgcgcttctgtgtgtt
ggtcagttcttccccgacgctccggagcagctggaggagtttaatgactacgtcgaaggc
cgctccaaaatccctattcccacctacttcatcggcgattacggcattgccgcccccaaa
actctgggagctgtggccaaggattccgctaatctagggtttaagatggatgggctaaaa
gtctgcgagaatttgtactggttgagaggcagcgggaagtttcttctccatggtttatct
gtggcatacttatctggtaggcaatctgcaaacagtcaacaattcggaacatacagccaa
gacgacattgattcattaagggcattaattgaggagccaggaattgttgatgtatttttg
actaatgaatggccaattggggtcacaaatggagttgtttcatctggtattccttctggg
atggatctatctattggtgattcaaacatctcagaattggtagctgaaattaaacctcgc
taccatattgcaggaagtgctggtgtctactatgatcgtgaaccttatgctaacattggt
gctgttcatgtgactcgttttatagcccttgctccagttgggaataaagataaacagaag
ttcatccatgcgctttcacctactccagcttccaaaatgtctgcttctgagctttgcact
aaaccaccaaatactactttgtctccatattcattagaaaaagaaattggatctggaaac
ggagccaccaaaagatctggggaaagtgtttctgattcccagtattggcggtatgatgtc
tctaaaaggcttaaacatggagatggtgctggcgataggttatgctttaaatttgtatcc
tcggggtcttgccaaagaggcgataagtgccatttcaggcatgatgaagatgcgcgggaa
caatctcttaggggtgtttgctttgaatttttaaataaaggaaagtgtgaaagaggtcca
gattgtacatataagcatgaattacaggaagaaggcaaagcattgtctggcaagcgatcc
ggttcaggaactggaagctcgaacaggtccaaggaatgctggttttgtttgtcaagcccc
aatttggagtcacatctaatcactagcgtaggagaacactgctattgtgcgctagctaaa
ggaccactagtgcaagatcatgtgctgataatacccattgagcatttgccaaacacccta
tttctacctccagaatgtgaaaaagacttatctaaacttcggggcagcctccaagcttgc
ttcaaaagacaaggaaaggaagttgttttctttgaatgggtttctaagcgtggaactcat
gctaatcttcaggttgttccaattccatcatccaaagcatcttctgttgaacaaattttc
aatttagcagccaagaagttgggctttacatttgcaacccttaaaaatgacaactatatg
gaagcacggaaatctctggggatgcatctaaatagaaatcagagtttattttatgtggaa
gttcctggaggaacaattttgtcacatgctgttgaggagaatgaaaacttcccttttcaa
tttgggcgtgaggttcttgctggattgttgaatatggctgacaaggctgactggaggaat
tgccagcttagtaaagatgaggaagctgaaatggcggagaagtttaagagacaatttaag
gagtatgatccaaacagctga
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