Salvia splendens (scarlet sage): 121806507
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Entry
121806507 CDS
T07627
Name
(RefSeq) far upstream element-binding protein 1-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121806507
03041 Spliceosome [BR:
sspl03041
]
121806507
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121806507
Spliceosome [BR:
sspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121806507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
121806507
NCBI-ProteinID:
XP_042062503
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All DBs
Position
1:791794..797710
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AA seq
751 aa
AA seq
DB search
MADESVITPPEASPAASAAGDGLKRKLEDIEHSDAPAAVTEPENCSDIDALKNGLQEEGN
GGVDESEAKRPRLESNGDDVAEADGSAVPQNGHTEEGKEEEPEVEKEEETKEEKEVESKE
EKEDEPKEESEKPETEDNNGQSMGVQVPVKEPHETATVETAPSDTEKTDVGSAEEAGQPN
AESEEEPSNLPREGDVPVQSADRLPGSDTILSRKMEVPNDKVGVLIGKAGDTIRSLQDNS
GAKIQIVRDADADPLAVSRPLELVGTLESINRAERLIKGVIAEADAGGSPSLVARGFNTA
QAASGGELLEIQVPVEKVGLIIGKGGETIRNLQTRSGARIQLIQPNGPADQSSEKMVRVT
GNKKQIDTAREMIIEVMNQTVSRPSPLSGGYNQQGYRPRGPLAPQWGPRSSHHAQFSGYD
YPHRGQYPSQSSQYPPPYGNYPPPQAPRSNFGPSWEQRPPASMHGPPPQGSYNYGQQQGP
GYGHSAPYPQAPSQPYGHGYNEAKYDHPASAQHYGHMSSQPTPYAQGGAHSGYGHQDQYN
KPPMYGVQPQAPHSESYGQPRPNQPGEAPYQGPGSATQPYGQNMPSQQSYPYVSSAPMQQ
SYPSYGGTTDGYGQTPTTASASAYPPQGGQPGYGQPGAQQPPAYSQAAPVAAGYGSYPTA
QPGYAEQPAANNTTYGYQGPTDPAYGATQATAAYPATAAAQSGYAQTQPTYDQSGGYGNV
PTAAAAAYGKSASPKAAYQQYDSSQMYGAHH
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgagagcgtgatcacgccgccagaagctagccccgctgcatccgccgccgga
gatggcctcaagaggaagctcgaagatattgagcacagcgacgctcctgcagcggttacg
gagcctgagaactgctcggatattgacgctttgaagaacggattgcaggaggaggggaat
ggcggtgtggatgaatctgaggctaaacggccccgtttggagagcaatggcgatgatgtt
gccgaggctgatggttcagcagttccacagaacggacacacagaagaggggaaggaagaa
gaacctgaagtggagaaggaagaagaaactaaagaggagaaggaagtagaatctaaagag
gagaaagaagatgaacctaaagaggagtctgagaagcctgaaactgaggataataatggc
caatctatgggggtccaagtacctgtcaaagagcctcacgagacggccactgtagaaacc
gctcctagtgacactgagaaaacggatgttggaagtgctgaagaagcagggcaaccaaat
gcagaatctgaagaagagccctccaatctgccgagagagggggatgttccagttcagtct
gctgacaggctgccaggttcagatacaatactgtcacgtaaaatggaggttcctaatgac
aaggttggagttctaataggcaaagcaggggatacaattcggtcactgcaggataattct
ggtgccaagattcaaattgtgagggatgctgatgcagatcccctagctgtatccaggcct
ttggaactagttggaaccttggaaagtataaatcgggcagaaaggttgataaagggcgtg
attgcagaggctgatgctggaggttcaccctcacttgttgctcgaggattcaacacagct
caggctgccagtggtggtgagctacttgaaattcaagtcccagttgaaaaggttggttta
ataattggaaagggtggagaaacaatcagaaacttgcagacaagatctggggcacgcatt
cagcttatacaaccaaatggtcctgccgaccaatctagtgaaaagatggtccgtgtgact
ggtaacaagaagcagatagatactgccagagaaatgatcatagaagttatgaatcagacc
gtgagcagaccatcacctctctctggtggatacaaccagcagggatatcgtccacgcgga
cctcttgctccacaatggggaccaaggagctctcatcatgcgcaattctctggttatgat
tatccacacagaggacaatatccttctcagagttcacaatatcctcctccatatggtaac
taccctccaccacaggctccgagaagcaactttggtccaagctgggagcaaagacctcca
gcatcaatgcatggacctccacctcagggcagctacaattacgggcagcagcagggccca
gggtatgggcattcagctccttacccgcaagctccttcacaaccatatggacatgggtat
aacgaggctaaatatgatcaccctgcttccgcacaacattatggccacatgagctctcag
ccaacaccatatgctcagggcggtgcccactcgggttatggtcatcaggaccaatacaat
aagccaccaatgtacggcgtgcagccacaagcacctcattctgagtcctatggtcagcct
aggcctaatcagcctggagaagcgccttaccaaggccctggctccgccactcaaccatac
ggtcagaacatgccgtctcaacagtcttacccctatgtgtcaagtgcacctatgcaacaa
agctatccttcctacgggggcacaactgacggatatgggcaaactcccactacagcatct
gcttctgcatatcctcctcaaggtggtcagcccgggtatggtcagccgggagctcaacag
ccaccagcatattctcaggcagcacctgttgcagctggttatggttcataccctacagct
caacctggttatgccgaacaaccagctgccaataatacaacatatgggtaccaagggccc
acagatccggcttatggtgctacccaagcaacagcagcttatcctgcaactgctgctgcg
cagtcgggctatgctcaaactcagcctacctacgatcagtctggtggctatgggaatgtt
cctacagcagcagctgctgcttatggaaagagtgcgtcgcccaaagctgcttatcaacaa
tacgattccagtcagatgtacggtgcacatcattga
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