Salvia splendens (scarlet sage): 121806525
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Entry
121806525 CDS
T07627
Name
(RefSeq) multisubstrate pseudouridine synthase 7-like
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspl03016
]
121806525
Enzymes [BR:
sspl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
121806525
Transfer RNA biogenesis [BR:
sspl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
121806525
Prokaryotic type
121806525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Effector_1
Motif
Other DBs
NCBI-GeneID:
121806525
NCBI-ProteinID:
XP_042062524
LinkDB
All DBs
Position
6:complement(4520568..4530930)
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AA seq
710 aa
AA seq
DB search
MLRSPIAKSLKNIKPFLKISSSLKPYSHLPEMSMNSVEESQVGILCYISQLPGFRGILKQ
RYSDFIVNEVGLDGNVIHLTTLDSPLEIAVEKKVEVTDLQDRDYTKEIESFRVLAGDSDV
EKLKKLTDQVVSGVINDDESIVLSPSSEKSHRTAVHNFFKERMKFLVTDTVDGPDSSSKC
IRVRINSGSNNGRGRNSRKRKNRDDKPYDSRGSDSSWPENLGKFLRFHLYKENKDTQEAL
GLLAKMLGNKLRSFGFAGTKDKRAVTTQRVTVFKQRASKLAALNEKLIGIKVGNFCHVNE
GLVLGQLQGNRFTITLRSISAENEDIIRAAATSLGENGFINYFGLQRFGSSSIATHLIGA
ALLRGEWKAAVSMILEPREGEKDATRQIREYYKESGDSEGTLRQLPRYLVAERAILQCFQ
KCPGNYLQALLAIPRTLRMMFVHSYQSYLWNHAASMRVQNYGFNQVVLGDLVYCKEEDND
KETLTSPLECEDDAGDDDIHIDCTIEDIPVADLSEVKNASVKVISEEDIAAEKYSIEDIV
LPLPGSRVSYPSNKIGKIYHDLAKKDGISLTESAHNSKEFSLTNMTGAYRRVFQKPKDFE
WELLKYTDPNLPLAETDMDVIAKSRASRIVRDSDEKENPHGCRPEAENCNNETNISANIK
DDTQTETSESQESQTALKLGFTLPASCYATMAIRELLKTSTSVAFHRALN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggagtccaattgcaaaatcactgaaaaacattaaaccctttctgaaaatctcg
tcctctctaaaaccctactcccacctgccggagatgagcatgaattccgtcgaagaatct
caagtagggattctctgctacatttctcaacttcccggcttccgaggaattctcaagcag
agatattcagattttattgtaaatgaagtgggtttggatggaaatgttattcatttaact
acactggactctccgttggagattgcagtggaaaagaaagtagaagtaactgatttacag
gatagagattataccaaagagatagaatcgttcagagttcttgctggcgattctgatgtt
gagaaattgaaaaaactcactgatcaagttgtttcaggagttattaacgatgatgaatct
attgttctttctccgagctctgaaaaatctcatcgaactgctgttcataacttcttcaag
gagagaatgaaattccttgttactgacacagtggatgggcctgattcttcatcgaagtgc
attcgtgtgcgaataaattcaggaagtaataatggcaggggaaggaactccaggaaaaga
aaaaatcgagatgataaaccatatgattctagaggctctgatagtagttggccagaaaac
cttggcaagtttcttaggtttcatctttacaaggagaacaaggatacacaagaagccctt
gggctccttgctaagatgcttggcaataagctcaggtcctttggttttgctggcacaaag
gataaacgtgcagtaaccactcagagggttaccgttttcaagcagcgggcaagtaagtta
gctgcacttaatgagaaattgattggtattaaagttggaaacttctgccatgttaatgaa
ggacttgttctcgggcaactccaaggaaatagatttacaattacattaagaagcatcagt
gctgagaatgaagatattattagagcagctgctacttctttaggggagaatggatttatc
aactattttggtttgcagcgctttggaagcagttctatagcaacacatctcattggagcc
gcattactgcgaggggaatggaaagctgctgtaagcatgattttggagccgcgagaagga
gagaaggatgccacaagacagataagagaatattacaaggagagtggtgacagtgagggt
actttaaggcagttaccaagatatcttgttgcagaacgtgctattctgcaatgcttccaa
aagtgtcctgggaattacttacaagctttgttggcaatacctaggacattgagaatgatg
tttgtgcatagttatcagagctatttatggaaccatgcagcgagtatgagagttcaaaac
tatgggttcaaccaggttgtattgggtgatttagtatactgcaaagaagaagataatgac
aaagaaacattaacatctcctttggagtgtgaagatgatgctggcgatgatgatatacat
attgattgcactattgaagacataccagtggctgatctttctgaagtaaaaaatgcatct
gttaaggttataagtgaggaggatattgctgctgagaagtattctattgaagatattgtc
cttcctttaccagggtcaagggtgtcttatccatcaaataaaattggaaaaatctatcat
gacttggcgaaaaaggatggtatcagcttgacggagagtgcacacaattcaaaggaattt
tcattaaccaatatgactggagcatataggcgggtgtttcaaaagcccaaggattttgag
tgggaattgctcaagtacacagatccaaatctaccactggccgagacagatatggacgtt
attgccaagtcacgtgcatccaggattgtcagagattcggatgaaaaggaaaatcctcat
ggttgcagaccagaggcagaaaattgcaacaatgagaccaatatatcagcaaacataaaa
gatgatacacaaactgagacctctgagtcacaggaaagccagacagccctcaagttgggg
tttaccctcccagcttcatgttatgcaactatggccataagggagctgctgaagacatca
acctcggttgcatttcacagggcgctgaactaa
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