KEGG   Salvia splendens (scarlet sage): 121806807
Entry
121806807         CDS       T07627                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase FANCM
  KO
K10896  fanconi anemia group M protein
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    121806807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sspl03400]
    121806807
DNA repair and recombination proteins [BR:sspl03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex
     121806807
SSDB
Motif
Pfam: Helicase_C DEAD ResIII Cas3-like_C_2 FANCM-MHF_bd
Other DBs
NCBI-GeneID: 121806807
NCBI-ProteinID: XP_042062897
LinkDB
Position
1:complement(1136365..1145078)
AA seq 1342 aa
MDDDDEFDWEAAVHEIDVACQAAAATAVPNSYCKQEMFVNVDEEMRKTGKFDAISSAPST
RQTTLDRFIGAPSFNSRKFEERVEISRGQQCMSSSIGENICQESEKLNEFVKIDAEAAKT
WIYPVNVPVREYQLSITRTALFANTLVALPTGLGKTLIAAVVIYNFFRWFPEGKIVFAAP
SRPLVLQQIEACHKIVGIPQEWTIDLTGQKSPSRRAEFWKCKRVFFVTSQVLEKDIHSGS
CLVKNLVCLVIDEAHHASGNYSYCVAVRELMDASTQLRILGLSATPGSNQKTIQHVIDNL
QISTLEYRSESDPDVQPYVHDRKIELIQVSMGDEAIDIDSLLLEVGRPYHAQLCSFGLLP
KRDFKTLSPCDFLRSKETFRKKPPASVPLSRHGEFMGYFAALVTLHHLRKLLSSHGIRPA
FEMLDEKLKKGWFARLLSRNEAILKAKLIMQKTITHGARSPKLTKMLEVLTEHFKVKDPK
NSRVIIFSNFRGSVRDILDALKHIGESVKATEFIGQNAGKNSKGQSQKIQQAVLEKFRTG
GYNVIVATSIGEEGLDIMEVDLVICFDANISPLRMIQRMGRTGRNQEGRVVVLACEGAEL
RGYKQKLANGKSISKHMIHGGTKSFNFHPSPRMVPHFLKPELQFLEMSIEEFVPCGSKAK
DSELIPGPAYKEKITDAEKDSLAKYFVATQEDAWRPSLIAFPHFQAYPSPANSVLHSSRT
QILIDTMQDLQDLPYSHDRNPSAEDDVILDPCLRVSEAEPRDNVIEDSERYTDPAEEESN
REAEESGRELQVTVKDLQSEDSHKPKTWLHTFLFASEFVSVDSVGNVLVLSLPQVPLDSS
SKRMESRNMASLDHSMHECVECAEIPLQPIDNQTVHEFSVGDLFSEDAKKFDEAEEILHS
PVSSRMQNEMDISDQDLIDVYLSPRLTNLIKSGVVPESPINDSGTWKGNQGDDIVCPALV
SPPNLETERLLNSCEHDKREDINGSLGEMDIDNGIRTPPLDCNTGTVGACSSPVPITNEL
RTPVTKLSGTSSSKDWTPDCGVQPESVEQPFKFRRLRKLGDCNRKVPTESRNSTGAGEKY
VSRRISHHKSTTLLKGEKKQAKGAATYIEEEAEVSSDAMASDDEEDVQEDSSFEDSFIDD
GLNPTTSNTQAGSTRVDMMAIYRRSLLSQSPFPRPPSFPTNHSPDSVVQSSKMDGSGSST
GTGRDDAPQTGFESTARNNKDAGNGVPTEMFESRPDSRKRKLSLHQAHSLPTLNLDTEFS
LLSGAAHENSTAHVHVETMEKAVDIFEDDDFYEGIDLDALEEEATKLFKKKTEHSTEKIV
GSDEIKEQNFGIFDAPSFDLGF
NT seq 4029 nt   +upstreamnt  +downstreamnt
atggacgacgatgatgaattcgattgggaagcagctgtgcacgaaatcgacgtggcgtgc
caggctgctgctgccacagccgttcctaattcatattgcaagcaagagatgtttgtgaat
gtggatgaagaaatgcggaaaacggggaaatttgatgctattagttcagcgccttcgact
aggcagactactttagatagatttattggggctccgtctttcaattcgaggaaatttgaa
gaaagggtggaaatttcgcgtgggcagcaatgtatgagtagtagtattggggaaaatatt
tgtcaagaatctgagaagcttaatgagtttgttaagattgatgctgaggctgccaagaca
tggatttaccctgttaatgtccccgttcgtgaatatcagttatctattaccaggactgca
ctgtttgccaatactttagtggcactgccaacaggacttggcaaaactctaattgctgca
gtagtcatatataatttcttcagatggtttcctgaaggaaaaatagtttttgctgctcct
tctcgaccactagtgctgcaacaaatagaagcttgccataagattgttggaattccgcaa
gagtggactattgatctaacgggacagaaaagtccttcgagaagagcagaattttggaaa
tgcaaacgcgttttttttgttacctcacaagtgttagagaaggatatacattctggatcc
tgtttggtgaaaaatctggtgtgcctggtgatcgatgaggcacatcatgcgtcaggaaac
tattcctactgtgtagctgtccgagagttgatggatgcttccacccaactaagaatatta
ggtttgtctgcgacacctggatctaaccagaagacaatccagcatgtcattgacaatctt
caaatatcaacacttgaataccggagtgaaagtgatcctgatgtacagccttatgtgcac
gatagaaagatagaactaattcaggtatcaatgggtgatgaagcgatcgatatagatagt
ctgcttttggaagttggacgtccatatcatgcccaactttgctcatttgggctgcttcct
aagagagacttcaagacattgagcccctgtgattttctaagatcaaaggagacatttcgc
aaaaagccgcctgcaagtgttcctctatcaaggcatggtgaattcatgggttattttgct
gctcttgttacgttgcaccatctcaggaaattgctttcaagccatggtataaggcctgca
tttgagatgcttgatgaaaaattgaaaaaagggtggtttgcacgattactaagcagaaat
gaagcaattttgaaagcaaaacttataatgcagaaaactattacccacggtgcccgtagc
cccaaactaacaaaaatgctggaagtactgactgaacattttaaggtaaaagatccaaaa
aactccagggtgataattttttcaaatttcaggggtagtgtcagggacatacttgatgca
cttaaacacattggggaatctgttaaagctacagaattcattggacaaaacgcgggaaaa
aactcaaaaggacaatctcaaaaaattcaacaagcagttttagagaaatttcggacaggc
gggtacaatgtcattgttgcaacttcaatcggtgaggaaggtcttgatatcatggaagtt
gatcttgtcatatgctttgatgctaatatctcgcctctgaggatgattcaacgcatgggg
cgaaccgggaggaaccaggaaggacgagttgtagttttagcatgcgaaggggcagaattg
agaggttataagcaaaagctagcgaatggcaagtctataagtaagcacatgatacatggt
ggcacaaagagttttaatttccacccgagtccaaggatggttccacattttctcaaacca
gaactgcaatttcttgaaatgtcaattgaagaatttgttccttgtgggtcaaaagcaaag
gattctgaactcattccagggccagcatacaaggaaaaaattacagatgctgagaaagat
tcgcttgccaagtattttgtcgccactcaagaagatgcttggagaccatctctcattgct
tttcctcacttccaggcatatccatcgcctgcaaacagtgtgctgcattcatctcgaacg
cagatactaatagataccatgcaggatttgcaagacctaccgtattctcacgatcgcaat
ccctcagcagaggacgatgtcattctagatccttgcttgagagtttcagaggcagagcct
cgtgataatgttatagaagattcagagaggtatactgatcctgctgaagaggaatcgaat
agagaagcagaagaatcgggtcgagagcttcaagtgactgtgaaagatttgcagagcgaa
gactctcacaaaccaaaaacttggcttcataccttcctctttgcttcagaatttgtgtct
gtcgatagtgttggaaatgtcctggtcttatcattacctcaagtgcctctagattcgagt
tctaaacgaatggaatctagaaatatggcttctcttgatcactcaatgcatgaatgtgtg
gagtgcgcagagattcctctgcaacctatagataatcagacagtacatgaatttagtgta
ggtgacctcttttctgaggatgcgaagaagttcgacgaggctgaggaaattctccattcc
ccggtttcaagcagaatgcagaacgaaatggatatttcagaccaggatcttatagatgtc
tatcttagtccgagactgactaatttaatcaaaagtggagttgttccagaatctccgata
aatgattctgggacgtggaagggcaaccaaggtgatgatatcgtttgtcctgctctcgtt
tctcccccaaatctggaaactgagcgtctcctaaactcttgtgaacatgacaagagggaa
gatataaatggcagcttgggggagatggatatcgacaatggcattcgaacacctccacta
gattgcaacacgggcacagtgggagcatgctcctcacctgttcccattacaaatgagctg
cgaactcctgttactaaactctcgggcacgagtagcagtaaagactggactccagattgt
ggtgtccagcccgaaagtgtcgagcagccgttcaagttccgtaggctgcggaagcttgga
gattgcaacaggaaagttccaacagaatccagaaactcaactggtgcaggcgaaaaatat
gtttcgagaaggattagccatcataaatccactacgcttctcaaaggtgagaagaagcaa
gcaaaaggtgctgcaacatatattgaagaggaagctgaggtatcatctgatgctatggcg
tcggatgacgaggaggatgtacaagaggacagttcgtttgaggatagctttatagacgac
gggctcaatcctacaacttctaatacccaagctggcagcactagggttgacatgatggca
atatacaggcgatcgttactcagtcaatctccatttccaagacccccaagcttcccgaca
aaccacagtcccgactctgtggttcaaagcagcaaaatggatggaagcggaagctcaaca
ggaacaggacgcgacgatgctcctcagactggctttgaatcaactgccaggaacaacaaa
gatgcaggcaacggggttcccacagagatgttcgagagcaggccggatagtcggaaaaga
aaactaagcctccaccaagcacactccctaccaacgcttaatttagacacggagttctct
ctactctccggggctgcacatgagaactcgactgcgcacgtacatgtagagacaatggaa
aaggccgtagatattttcgaagacgatgatttttatgaagggatcgatcttgatgcacta
gaagaagaagctacaaagctgttcaagaaaaaaacagagcactcaacagaaaaaatagta
ggttctgatgaaattaaagaacaaaattttgggatttttgatgcgccttcatttgatctt
ggtttttaa

DBGET integrated database retrieval system