Salvia splendens (scarlet sage): 121807069
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Entry
121807069 CDS
T07627
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121807069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121807069
Membrane trafficking [BR:
sspl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
121807069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Urb2
Motif
Other DBs
NCBI-GeneID:
121807069
NCBI-ProteinID:
XP_042063196
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Position
1:1452522..1462409
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AA seq
793 aa
AA seq
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MMISNGIEDEEKWLAEGIAGIQHNAFYLHRALDSNNLREALKYSAQLLSELRTSRLSPHK
YYELYMRAFDELRRLEIFFKEEDRHGCPVIDLYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDILRDLVEMCRAVQHPVRGLFLRSYLAQVSRDKLPDIGSEYEGEGDTVMDAVEFV
LQNFTEMNKLWVRMQHQGPHREKEKLEKERNELRDLVGKNLHVLSQIEGIDLEMYRDTVL
PSVLEQIVNCKDELAQYYLMDCIIQVFPDEYHLQTLETLLSACPQLQPTVDLKTVLSQLM
ERLSNYASLNPELLPEFLQVEAFSKLSNAIGKVMEAQVDMPVVGAISLYVSLLTFTLRVH
PDRLDYVDQVLGACVKILSGKPKLEDSKATKQVVALLSAPLDKYDDIVTALTLSNYPRVM
DHLDAGTNKVMAMVIIRSIMKNKSWVSTSDKVEVLFELIKGLIKDLEGISTDELDEEDFN
EEQNSVACLMHMLYNDEPEEMLKIICTVWKHVMSGGPKRLPFTVPSLVFSALKLVRRLQG
QDGDVGGEEVPATPKKIFQLLNQIIETLSVVPAPELALRLYLQCAEAANDCDLEPVAYDF
FTQSFVLYEEEVADSKAQVTAIHLIIGTLQRVNVFGVENRDTLTHKATGYSAKLLKKPDQ
CRAVYACSHLFWVDDQDGIKDGERVLLCLKRSLRIANAAQQMTNVTRGSSGPVTLFVEIL
NKYLYFFEKGNPQITASVIQGLIELIKTEMQSDNAVVNPVSDAFFTSTLRYIQFQKEKGG
AMGEKYDSIKLGG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatcaaacggaatcgaagacgaagagaaatggctcgccgaaggcatcgccgga
attcagcacaacgccttctacttgcatcgagctttggattccaataatctccgggaagca
ctcaaatactctgcgcaattgttatctgagctaagaacttcgaggctgtcgccccacaaa
tattatgagctctatatgcgggcttttgacgaattgaggagattggagattttcttcaaa
gaagaagatcggcatggctgtccagtgattgatctatacgagcttgttcagcatgcaggg
aacatcttgccgagactgtatcttctatgcacagttggatctgtttatataaaatcaaaa
gaggctccggctaaggatattctcagggatcttgttgaaatgtgccgtgctgttcagcat
cccgtccgtgggcttttcctaagaagttatcttgctcaagttagtagagataagctacca
gatattggttcagagtatgaaggcgaaggtgatactgtcatggatgctgtggagtttgtg
ctacagaatttcacagagatgaataaactctgggtccggatgcagcaccagggacctcac
agggagaaagagaaacttgaaaaggaacggaacgaactgcgcgatcttgtgggcaagaat
ttacatgtcctgagtcagatagaaggtattgaccttgaaatgtacagagacactgttctt
cctagtgtattggagcagattgtgaattgtaaggatgaacttgcccaatattatttgatg
gactgcataattcaagtatttccagatgaataccacttgcagactcttgagacattattg
agtgcctgcccccaacttcaacctacggttgacctgaaaacagttttatctcaactgatg
gagaggttatcaaactatgcttccttgaatcctgaattgttaccagaatttttacaagtt
gaagcattttcgaagctgagcaatgcaattggaaaggtcatggaagcacaagttgatatg
cctgttgttggagcaatttctttatatgtttctcttctgactttcactctccgtgtacat
cctgataggctggattatgtggatcaagtgctgggagcatgtgtcaaaatattatctgga
aaaccaaagcttgaagacagtaaagcaacaaaacaagttgtcgcccttctgagtgctccg
cttgataaatatgatgatattgtcacagctctcacactttctaattatcctcgtgtgatg
gatcatcttgatgctggaacaaataaagtcatggcgatggttatcatccgaagcattatg
aaaaacaaaagttgggtttcaacttctgacaaggttgaggtactatttgaacttatcaaa
gggcttataaaggatttggaagggatttctacagatgagcttgatgaagaggatttcaac
gaggagcaaaactctgttgcatgcctgatgcacatgttgtataatgatgaaccagaggag
atgttaaagataatatgtactgtgtggaagcatgtaatgtctggaggtccaaaacgccta
cccttcacagtcccatctcttgttttctctgctctcaagttggtgaggagactgcaaggc
caagatggagatgtaggtggagaggaagttccagccaccccaaagaaaatatttcagctc
cttaatcagatcattgagactctttccgttgttcctgcacctgagctggcattaaggctg
tacttgcaatgtgcagaggcagctaatgattgcgaccttgagccggtggcttatgatttt
ttcacacagtcctttgtcttatacgaggaagaagttgcggattctaaagcccaggtgaca
gctatacacctaataatagggactctacaaagggtgaatgtcttcggtgtcgagaacagg
gataccttgactcataaagccacagggtactcagcgaaacttctaaagaagccagatcag
tgcagagcagtttatgcgtgttcacatcttttttgggttgacgatcaggatggcattaaa
gatggagaaagggttctgctctgcttgaagcgttcattaaggattgccaacgctgctcag
cagatgacaaatgttaccaggggtagcagtggacctgtaactctattcgttgagatactt
aacaagtatctatatttctttgagaagggaaatcctcagattacagcttctgtgattcaa
ggcctaatagagttaattaaaactgagatgcagagtgacaatgcagttgtaaatcctgta
tcagatgcattcttcacaagcaccttgcgttatattcaattccagaaagaaaaaggaggc
gctatgggtgaaaagtacgattctattaagttgggaggataa
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