Salvia splendens (scarlet sage): 121807266
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Entry
121807266 CDS
T07627
Name
(RefSeq) thioredoxin-like protein YLS8
KO
K12859
U5 snRNP protein, DIM1 family
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121807266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121807266
Spliceosome [BR:
sspl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
121807266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DIM1
Thioredoxin
Thioredoxin_7
Thioredoxin_8
DUF3192
Motif
Other DBs
NCBI-GeneID:
121807266
NCBI-ProteinID:
XP_042063416
LinkDB
All DBs
Position
6:complement(6335550..6337679)
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AA seq
142 aa
AA seq
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MSYLLPHLHSGWAVDQAILAEEERLVLIRFGHDWDETCMQMDEVLASVAETLKNFAVIYL
VDITEVPDFNTMYELYDPSTIMFFFRNKHIMIDLGTGNNNKINWAMKDKQEFIDIVETVY
RGARKGRGLVIAPKDYSTKYRY
NT seq
429 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatttgctgcctcaccttcactccggctgggccgtcgatcaggcgatcctggcg
gaggaggagcgcctcgtcctcatccgcttcggacacgattgggacgagacctgcatgcag
atggatgaggtgctggcttctgttgccgaaacactaaagaactttgctgtcatatacctg
gtggatatcacagaggtccctgatttcaacacaatgtacgagttgtatgacccctccacc
atcatgttcttcttcaggaacaagcacattatgattgaccttggcactggaaacaacaac
aagatcaactgggccatgaaggataagcaagagttcattgacatcgttgagactgtctac
cgtggtgccaggaaggggcgtggtctagttatcgcccccaaggattactccaccaaatat
cgttattga
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