KEGG   Salvia splendens (scarlet sage): 121807417
Entry
121807417         CDS       T07627                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03010  Ribosome
sspl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    121807417
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121807417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:sspl03011]
    121807417
   04121 Ubiquitin system [BR:sspl04121]
    121807417
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sspl04147]
    121807417
Ribosome [BR:sspl03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    121807417
  Archaea
    121807417
Ubiquitin system [BR:sspl04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   121807417
Exosome [BR:sspl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121807417
  Exosomal proteins of colorectal cancer cells
   121807417
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD Thioredox_PDIA6_C OTU1_UBXL Fer2_3 Ubiquitin_5
Other DBs
NCBI-GeneID: 121807417
NCBI-ProteinID: XP_042063578
LinkDB
Position
6:complement(35610051..35610724)
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacggggaagacgatcaccctggaggtggagtcgtcc
gacaccatcgacaacgtcaaggccaagatccaggacaaggagggcatcccgccggaccag
cagcgcctcatcttcgccggcaagcagctcgaggacggccgcaccctcgccgactacaac
atccagaaggagtccacgctccacctcgtcctccgcctccgcggcggcgcgaagaagcgc
aagaagaagacctacaccaagccgaagaagatcaagcacaagcacaagaaggtgaagctc
gccgtcctccagttctacaaggtcgacgattcgggaaaggtgcagcgcctcaggaaggag
tgccccaacgcggagtgcggcgccgggacgtttatggcgaatcattttgaccgccattac
tgcggtaagtgtggcttgacctatgtctacaataaggccggtggagattga

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