Salvia splendens (scarlet sage): 121807496 Help Entry 121807496         CDS       T07627                                  Name (RefSeq) coatomer subunit alpha-1-like   KO K05236   coatomer subunit alpha Organism sspl  Salvia splendens (scarlet sage) Brite KEGG Orthology (KO) [BR:sspl00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sspl04131]     121807496   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sspl04147]     121807496 Membrane trafficking [BR:sspl04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     121807496 Exosome [BR:sspl04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    121807496   Exosomal proteins of bladder cancer cells    121807496 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 Beta-prop_EML_2 WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st TPR_COPA_B Beta-prop_Aladin WD40_RFWD3 Beta-prop_SPT8 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st ANAPC4_WD40 A2M_recep Beta-prop_RIG_1st Motif Other DBs NCBI-GeneID:  121807496 NCBI-ProteinID:  XP_042063672 LinkDB All DBs Position 1:1810533..1816385 Genome browser AA seq 1286 aa AA seqDB search MLVKFEIKSNRVKGLCFHSWRPWILASMTTGVIQLWDHFMGILIGDFRQHRGPVRSVHFH TSQPLFVSGGDDFKIKVWNYELHQCLFTLLGHHDYIRTVQFHHEAPWILSASDDQTIRIW NWQSRTCISVLNGHSHYVMCASFNPKEDIVVSASLDQTIRVWDIGALRKKSTVSPADDIL ELSQMNPDFFGGVDAVVKYVLEGHNRGVTWVSFHPTLPWIVSCADDRQVKVWHMEDKKVI LTLKGHMNNVSCVLFHARQNVIVSNSEDKSIRVWDATNGTALQIYKKKHDKFWILAGHPE MNLLAAGHDSGMIVYKLKRERPAFSVSANALVYVKGRFLCVFEYSTQKDTQLIPIRQPDF NKLNQAPRILSYSPAENAVLVCSDTDGGSYELYIIPQDSYGRGDAVQDAKKGTGGSAVFI ARNRFAVLERSTNKVLIKNLTNDVVNKSVLPVATNAIFYAGKGNLLCRSENEVVIFDPQQ MIVLGDLQTSFVVRYVVWSPDMKSVALLGLHTIVLADKNLVQRCNRHETIRVKSGAWDDN GVFIYTTLTHIKYCLPNGESGIIKTLDVPVYVTKIYGSTIFCLDRDGISRPIIIDSTEYI FKLSLLRKRYDQVMSMIMNSELCGQAMIAYLKKGFPQAALHFERSRCNLALKSGNIEKAL ELGKKINEKDYWYRLGVDSLWQGNAGIVEYAYQKTRNFERLSFHYLITGNLKKLSKMMKI AEVKNEVMGQFHDALYLGDVQERVKILENAGHLPLAYVTASLHGLHDIAERLASNLGENL PSLPEGKKASLLIPPSPVLCAGDWPLLRVSEDIFEGGLDEAGRGVDEDYEEAVDVDYEEP FDADLGEALNTGEVDGMENEGIAVVAEEAVKHEGNDKVGGWDHEDLDLPPEMPEADSNAC SSVFVAPSPGMPVIQIWVQRSSLAAEHAAAGNFEIAMRLLYRQLGIRNFSPLRTQFIDLH MGSHTYLPDCTSAPVASAALERGESASPNVGGHPALSSNSSRLDENATGGYMATTGHLGI RNIQPWGTQFTDPHMGSHTHLPDYASAPGASVASPNVGGHPALSTKFSRLDEKVTDGYMA TTDGKFSDALGYFMSIMHTIPLIVVERMEEVEKVKELVITIKEYVLGFKMELKRRELKDD PVRQQELAAYLTHCNLQPLHTRLALLNAMSVCYKAQNLRSAANFAQRLLETEPSDEYQDR MARQVVQAAAARSMHDATQLNYDFRSPFVVCGATFVPIYRGQKYVTCPYCTAQFVPSQQG QICAVCELAEIGSEGSGLMCSHSQIT NT seq 3861 nt NT seq  +upstreamnt  +downstreamnt atgttggtgaagttcgagataaagagtaatagagttaaagggctgtgcttccacagctgg cggccatggatcctggcgagtatgaccactggcgtcatccagctatgggatcactttatg ggcattctcattggtgacttccgccagcaccgtggccccgttcgcagcgttcatttccat acatctcagccactgttcgtttctggaggtgatgatttcaaaatcaaggtgtggaattac gaattgcatcagtgtctatttactctcctgggtcatcatgattacattcgcacagttcaa tttcatcatgaagctccctggatcctcagtgcaagtgatgatcagacaatcagaatatgg aactggcagtctcgaacttgcatttcagtgttgaatgggcacagccattatgttatgtgt gcctcatttaatcccaaagaagatattgttgtttcagcctctttggatcagaccatccgt gtttgggatattggtgccttgaggaaaaaatccaccgtgtctcctgctgatgacattcta gaactgtcgcaaatgaatccagatttctttggaggggtcgatgctgttgtcaagtatgtc ttggaaggtcataatcgaggggttacctgggtttcttttcatcccactctcccttggatt gtttcttgtgcagatgatcgccaagttaaagtctggcatatggaagataagaaggtgatt ctcacattgaaaggccacatgaacaatgtgtcgtgtgttctgttccatgcaaggcagaat gtcattgtatcaaactccgaagacaagagcattcgagtttgggatgctactaatggaact gccctgcagatatataaaaagaagcatgacaagttctggatccttgcaggccatcctgag atgaaccttctggctgctggtcatgacagtggaatgattgtctataaattaaagagagaa cggcctgccttctctgtcagtgctaatgcactggtctatgtcaagggcagatttttatgt gtttttgagtattcaactcagaaagatactcaactgatccctatacgccaacccgatttt aataaattgaatcaagcacctcggatactttcttatagtcctgctgaaaatgctgttttg gtctgttcagacacagatgggggatcatatgaactctacattatcccccaggatagctat ggaagaggtgatgcagttcaagatgcaaaaaagggtactgggggttcagctgttttcatt gcccgaaataggtttgccgtgcttgagagaagcaccaacaaagttctgatcaagaacctt acaaatgatgtagtgaacaaaagtgttctgcccgttgctactaatgcaatcttctatgcg ggcaaaggaaatttgctgtgcagatcagagaacgaagtagtcatctttgatccgcaacaa atgattgtactcggtgatcttcagacatcttttgttgtcaggtatgtggtttggtctcca gatatgaagagtgttgctttacttggtttacacacaattgttctagcggataaaaacctt gttcagcgctgcaaccgtcatgagactatacgtgttaaaagtggagcttgggatgataac ggagtcttcatctacacaactttgacccacatcaagtactgccttcctaatggggaaagt ggaatcatcaagacgcttgatgtcccagtgtatgtgacaaagatatatggtagcactatc ttttgcttggaccgagatgggataagccgtcctataattattgattctacagaatatatt tttaagctatccctgctgcgaaagagatatgaccaagttatgagcatgattatgaattct gaattatgtggacaggccatgattgcttatctgaagaagggcttcccacaagctgctctt cattttgagagatctcgctgtaacttagcccttaaaagtggtaatattgagaaagcactt gaattgggcaaaaaaattaatgagaaagattactggtacaggcttggtgtcgattctctt tggcagggtaatgctgggatagttgaatacgcataccaaaagacaaggaactttgagaga ttgtctttccattacctgataactggtaatctgaaaaaattgtccaaaatgatgaaaatt gctgaagtaaagaatgaagtcatgggccagtttcatgatgcactctatcttggtgatgtg caggagcgcgtcaagattctggagaatgcaggtcacttgcctcttgcatatgtcacagct tcgctccatgggctccatgatattgcagagcgtcttgcttctaatttgggggagaatctt ccttctcttccagaggggaagaaagcttcacttctgatacctccaagtccggtgttatgt gctggagattggcctttgttaagggttagtgaagacatatttgaaggtgggcttgatgag gcaggtaggggggttgatgaagattatgaagaggcagtagatgttgattatgaagagcca tttgatgctgatttgggagaggctctgaatactggtgaggtggatggcatggagaatgaa ggcattgccgtggtagcggaggaagcggttaagcatgaagggaatgataaggtgggtggg tgggatcatgaagatcttgatctgcctccggaaatgccagaggcagatagtaatgcatgt tcgtcagtgttcgttgctccttcccctggtatgcctgtgatccagatctgggtccagaga tcatctctagctgctgaacacgcagctgctggaaactttgagatagcaatgcgcttattg tatcgacaattgggaataaggaatttctcccctctgagaacacaatttattgatcttcac atgggcagtcatacttatttacctgattgcacctcagcaccagtggcatctgctgcactg gaaaggggtgagtcagccagtccgaacgttggaggacatcctgcactctcgtccaattcc tctcgattggatgaaaatgccacgggcggttacatggctaccactggacacttgggaata aggaatatccaaccttggggaacacaatttactgatcctcacatgggcagccatactcat ttacctgattacgcctcagcaccaggggcatctgttgccagtccgaatgttggaggacat cctgcactctcgaccaaattctctcgattggatgaaaaggtcacggacggttacatggct acaactgatggaaagttttctgatgctcttggatatttcatgtctattatgcacacaatt ccgctgattgtggtcgaaagaatggaagaagttgaaaaggttaaggagttggttataacc atcaaagaatacgttctcggttttaaaatggaactgaagaggagagaactgaaagacgat ccagtacgtcagcaggagcttgccgcctatttaactcattgtaacctccagccactacac accagactcgctctattgaatgccatgagtgtttgctacaaggcacaaaatctaagaagt gcagccaactttgcccagcgacttctggagacggagccaagtgacgagtaccaagacaga atggcccggcaagttgtgcaggctgctgccgcgaggagcatgcatgatgctactcaactg aactacgacttcagaagtccttttgtggtatgtggggccacattcgtcccaatttacaga ggccagaaatatgtaacctgcccatattgtactgcacaattcgttccatctcaacaggga cagatctgtgctgtctgtgagcttgcagagattggatctgagggatcaggcttgatgtgc tctcattcacaaatcacatga

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