Salvia splendens (scarlet sage): 121807686
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Entry
121807686 CDS
T07627
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121807686
Spliceosome [BR:
sspl03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
121807686
Other components
Complex C specific factors
121807686
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Mt_ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
121807686
NCBI-ProteinID:
XP_042063887
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Position
6:complement(37491446..37496967)
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AA seq
846 aa
AA seq
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MDEYQERERFGMDNDYEDGQWIGGEFYGKRRQKRAQTKDDVLYGVFASGDSDSDEGFGSK
SKRRKDSSKKADYSKPVSFVSTGTVMPSQEIEHNSKEDIDVMDEDDVKPAGLGLGFGSAS
SRKANEDKEEDDDFLPTAFGKIIREGAKLREEKEKEKARAAKKTSQASKRDLDPNGVGEF
EKHTKGIGMKLLEKMGYKGGGLGKNEQGITAPIEAKLRPKNMGMGFNDYKEAVRPAIQEV
DEKSVPHPSHSLEGRTNEKLWSKKVSKKKAYITAAELLAQKEEKGFEVVQKVFDMRGPQV
RVLTNLENLNAEEMARENDVPMPELQHNIKLIVDIIEHDIQKLDSNLRNERETVVALQKE
KEKLQQEAHDQKQRLGNMEEIIAVLDQLGEKSSSGLLTLESLANSFVDLQTRFPDEYTLC
NLSCIACSHARPLFIRIFQGWDPLQNPTHGTEVVSLWKKLLQGKDSLNFSGTASPYVQLL
MEVVFPAVRISGTNSWQARDAEPMLRYLDSWEELLPPSILQAILDMVVMSKISAAVDSWD
PRRETIPIHEWIHPWLPLLGHKFESFYHTIRHRFASVLHAWHPSDGSAFAILSPWKTVFE
PASWEHLMVQHIIPKLSTVMHEFQINPANQSLDQFNCVVKWASAIPTHHMLQLMDVFFNK
WQEVLYHWLCSKPNFDEVTQWYLNWKELLPQELQANEHIRYRLNLGLAMMNQAVEGMEVA
PPGLKENISYLRVREQRQFETQKKAAAQAQHRTMPGLDNEIPAEGISGGNKMSLKEVIEI
YAQQNGLLFKPKPGRMQDGHQIYAFGNISIIVDSLNQKVFAQTEDRWPLVSLEQLLELQS
RSKMKR
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtatcaggagagggagaggtttggcatggataatgattatgaggatggccag
tggattggtggcgagttttatggcaagcgcagacagaaacgtgcgcagacgaaagacgat
gttctttacggcgtgtttgcctctggtgacagtgactccgacgaggggtttgggtcgaag
agcaagcgcaggaaggattcgtcgaagaaggcggattattccaagccagtcagttttgtt
tcgactggcacggttatgcccagtcaggagattgaacataattccaaggaggatattgat
gtaatggatgaggatgatgtcaaacctgctggtttaggccttgggtttggttctgcttct
tcgagaaaggcaaatgaagacaaggaagaagatgatgacttcttgcctactgcctttggt
aagattatcagggaaggtgcgaagttgcgggaagagaaggaaaaggagaaggctagggca
gccaaaaaaacatctcaagctagcaagagggacttggacccgaatggtgttggtgaattt
gagaaacataccaagggtattggaatgaagttgctagagaagatgggctacaagggtggc
ggtcttggtaaaaacgagcagggaattacggctcctattgaggccaagcttcggcctaag
aatatgggaatgggttttaatgactataaagaagccgttcgtccagcaatacaggaagta
gatgaaaaatctgttccacatcccagccattctctagaaggtcgcactaatgagaagctt
tggtcgaagaaagtttctaagaagaaggcttatataacagcagcagaactgttggcccag
aaggaggagaaaggtttcgaagttgttcagaaggtttttgacatgagggggccacaggtt
cgggttctgacaaatttggaaaacttgaatgcagaagaaatggccagagaaaatgatgta
ccgatgcccgagcttcagcataatatcaaattgatagttgatataattgagcatgacatt
cagaaacttgatagtaatctgaggaacgaaagggagactgtggttgctttacagaaggaa
aaggagaagctgcaacaggaggctcatgaccagaaacagcggcttggaaacatggaggag
ataatagctgtattggatcaattgggtgagaagagctcttcaggattgttaactctagaa
tcacttgctaattcatttgtagacttgcagacaagatttcccgatgaatacacattgtgc
aacttatcttgcattgcgtgctcgcacgctcggcctctatttattagaatatttcaggga
tgggacccacttcagaatccaactcatggaactgaggttgtatcactgtggaagaaactg
ttacaaggtaaagattctttgaatttctctggtacagcttctccatacgtgcagcttctt
atggaagttgtatttcctgccgtaagaatatctgggaccaactcttggcaagcaagggat
gcagagcccatgcttaggtatttggattcttgggaagaactcttgcctccttctatccta
caggccatactcgacatggttgttatgtcaaaaatatcagctgctgtagactcttgggat
ccacgtagagaaactattccgatccatgaatggatccacccttggttaccattgttgggg
cacaagtttgagagtttctatcacacaattcgccatagatttgccagtgttcttcatgct
tggcatccaagtgatggatcagcttttgccatattgtctccttggaaaactgtcttcgaa
cctgccagttgggagcacttaatggttcagcacatcattccaaaactatcgactgtcatg
catgaattccaaataaatccagctaatcagagtctcgatcaatttaattgtgtcgtaaaa
tgggcgtctgctattcctactcatcacatgctgcagttaatggatgttttctttaataag
tggcaagaagtgctttatcattggttgtgttcgaaaccaaattttgacgaagtgacccag
tggtatctcaactggaaagagctccttcctcaagaacttcaggcaaatgagcatatccgg
tataggcttaatcttggtttggccatgatgaaccaggcggttgaaggcatggaggtggct
ccgcctggattgaaagagaatattagctatctcagggtgcgcgagcaaaggcagtttgaa
actcagaaaaaagccgctgcgcaagctcaacataggaccatgccaggtttggataatgaa
attccagcagagggcattagtggtggaaacaagatgagcttgaaagaagttattgaaatc
tatgctcagcaaaatggtttgctgttcaagcccaaacctggtagaatgcaagatgggcat
caaatatatgcatttggtaatataagcataatcgtagattccctcaaccaaaaggtgttt
gcccagaccgaggacaggtggccccttgtatcacttgagcagctgctggaattgcaaagt
cgttctaagatgaagcgataa
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