Salvia splendens (scarlet sage): 121807760
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Entry
121807760 CDS
T07627
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121807760
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121807760
Membrane trafficking [BR:
sspl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121807760
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121807760
Exosomal proteins of bladder cancer cells
121807760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
TPR_COPA_B
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Aa-Ago_N
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
121807760
NCBI-ProteinID:
XP_042064005
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Position
6:complement(284108..290188)
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AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHTKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNADFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVLFHARQDIIVSNSEDKSIRVWDATKRTGLPTFRREHDRFWILSAHP
EMNLLAAGHDSGMIVFKLEIERPAFSVSGDSVFYVKDRFLRTFEYSTQKDTQLIPIRRPG
SNSLNQAPRTLSYSPTENAILVCSDVDGGSYELYVIPKDSYSRGDTAQEAKRGAGGSAVF
VARNRFAVLEKSSNQVLVKNLKNEVVKKSVLPVATDAIFYAGTGNLLCRAEDKVVIFDLQ
QRIVLGDLQASFVRYVVWSQDMESVALLSKHSIVIADKKLVHRCTLHETIRVKSGSWDDN
GVFIYTTLTHIKYCLPNGDSGIIKTLDVPVYVTKIYGNTIFCLDRDGKNRPIIIDSTEYI
FKLSLLKKRYDHVMSMIKNSELCGQAMIAYLQQKGFPQVALYFVKDERTRFNLALESGNI
EKALESAKKIDEKDYWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFHYLITGNLDKLSK
MMKIAEVKNEVMGQFHNALYLGDVRERVKILENAGHLPLAYITASIHGLHDVVERLSAQL
GDNVPSLPEGRKASLLIPPSPVLCAGDWPLLMVSKGIFEGSLDDAGKGAEEDYEEAADAD
WGEGLDIGDVDHLQNGDISMVLEDEDVHNENDEEGGWDLEDLDLPPDADTPKVASNARSS
VFVCPTPGMPVSQIWVQKSSLAAEHAAAGNFDTALRLLSRQLGICNFGPLKSQFIDLHLG
SHSYLRACTSAPVISVAVERGWSESASPNVRGPPALIFDFSQLDEKLKAGYKATTTGKFS
EALRHFLSILHTVPLVVVETRREVDEVKELVIVVKEYILGLQMELKRRELKDNPGRQQEL
AAYFTHCKLQPPHLRLALASAMTVCFKAKNLSTAANFARRLLESNPANENQARQARQVLQ
AAERNMTDTTQLNYDFRNPFVVCGATYVPIYRGQRDVTCPYCTTHFVPSQQGQLCTVCDL
AAVGADASGLFCSPSQMR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaaattcgagaccaagagcaatcgagtgaaaggattgagctttcacaccaag
cgcccatggatcctcgcaagtctccacagcggtgtgatccagctctgggattaccgcatg
ggcaccctcatcgaccgattcgacgagcacgatggacccgtccgcggcgttcatttccat
aaatcgcagccgctttttgtgtccggaggcgacgattacaaaattaaggtttggaattac
aaactgcatagatgtctatttactcttcttggtcatcttgactatatccggactgtccag
tttcatcatgagtatccttggatagtaagtgcaagtgatgatcagacaatcagaatatgg
aactggcaatcacgtacttgcatttctgtgttaacggggcacaaccactatgtcatgtgt
gcttcatttcaccccaaagaagacttggttgtttcagcctctttggatcagactgttcgt
gtttgggatattggtgccttgaggaagaaaacagtatctcctgctgatgacattctgcga
ttgtctcaaatgaatgcggacttctttggtggggttgatgctgttgtgaagtatgtcctg
gaaggccacgatcgaggggttaactgggcttcttttcatccaactctccctctgattgtt
tctggagctgatgatcgccaagtaaaaatctggcgcatgaatgacacaaaagcttgggag
gtggacacattgagaggtcacatgaacaatgtttcttgtgttctgttccatgcaaggcag
gacattattgtatcaaattcagaagacaagagcattagagtttgggatgctactaaaaga
actggcttgccgacattccgcagggagcatgacaggttctggatcctttctgcccaccct
gagatgaatctactcgctgctggtcatgatagtggtatgattgtctttaagctagagata
gaacgccctgccttttctgtcagtggtgactctgtgttttatgtcaaggatcggtttcta
cgcacttttgagtattccactcagaaagatacccagctgataccaatccgtcgtcctggt
tccaatagtttgaatcaagcaccacggactctttcttatagtcctactgagaatgcaatt
ttggtttgctcagacgtggatggtggttcatatgagctttatgttatacctaaagatagc
tacagcagaggtgacacagctcaagaggctaaaagaggtgccgggggttcggctgttttt
gtggctcggaataggtttgctgtgcttgagaagagcagcaaccaagtcctggtgaagaac
ctaaaaaatgaagtagtgaaaaagagtgtcctgcctgttgctactgatgccatattctat
gctggtacagggaatctgctctgccgggccgaggacaaggttgtcatttttgatctccaa
caaagaattgttcttggtgatcttcaagcctcttttgttaggtatgtggtttggtctcag
gatatggagagtgttgctttgctgagcaagcattcaattgttattgctgataaaaagctt
gtgcaccgctgcactcttcatgagaccattcgtgttaagagtggatcatgggatgataat
ggtgtttttatctacactacactgacacatattaaatactgcctgcctaatggtgatagt
ggcattataaagaccttggatgttccggtgtatgtaacaaagatatatgggaacacaatc
ttttgcctggaccgagatgggaaaaaccgtccaatcattattgactcaacggaatatatt
tttaagttgtccctgctgaagaagagatatgatcatgttatgagcatgataaagaattca
gaactatgtggacaagccatgattgcatatttgcaacagaagggcttcccacaagttgct
ctctattttgtgaaggatgagagaactcgcttcaacttagctcttgaaagcggtaacatc
gagaaagcccttgaatctgctaagaaaattgacgagaaggattactggtacaggctagga
gtagaggccctacgacagggaaatgcaggaattgttgaatatgcgtaccagaagacaaag
aactttgagaggctttcttttcattatctgataactggcaatctggacaagttgtcaaaa
atgatgaaaatcgctgaggtaaaaaatgaagttatgggccagtttcataatgcattgtat
cttggtgatgtccgagagcgggtgaaaattctggagaatgcgggtcacttgcccctggct
tacataacagcttccattcatgggctccatgacgtagtggagcgtctatctgcacaacta
ggagataatgttccttctcttcctgaagggagaaaagcttctctgttgatccctcctagt
ccagtgctatgcgctggagattggcctttgttaatggtgagtaaaggcatatttgagggc
tctcttgatgatgcaggtaaaggtgcagaagaagattatgaagaggctgcagatgctgat
tggggtgagggtttggatattggcgacgtggatcatctgcagaatggagacatcagtatg
gtgctggaggatgaagatgtgcacaatgagaatgatgaggagggaggatgggatcttgag
gatctagatctgcctcctgatgctgatacgccgaaggtggcttctaatgcacggtcttct
gtttttgtttgccccacgcctggtatgcccgtgagccaaatttgggtccagaagtcatct
cttgctgctgaacacgcagctgctggcaacttcgatacagcacttcgtttgttgagccgt
cagttagggatatgcaattttggccctttgaagtctcaatttattgatcttcacctgggc
agtcacagttacctgcgtgcctgtacttcagcaccagttatatctgttgcagtagagaga
ggttggagtgaatctgcaagccccaatgtgcgaggccctcctgctcttatcttcgatttc
tctcaactagatgagaagctgaaggctggttacaaagcaacaaccaccggaaagttttct
gaagctcttcgacatttcctgtcaattcttcacacagttccactggttgtggttgaaaca
agaagagaggtggatgaagtgaaggaattggtaatcgtagtaaaggaatacattcttggc
ttgcaaatggagcttaagagaagggaactgaaggacaatccaggtcgtcagcaggaactt
gcagcgtatttcacacattgcaagctccagccaccacacttgagacttgcactggctagt
gcaatgactgtttgcttcaaggcaaaaaatctgagcaccgcagccaactttgctaggcga
cttcttgagagtaatccagccaatgagaatcaagcaagacaagctcgccaggttctgcag
gcggctgagaggaatatgacggataccacgcagctcaactatgatttcagaaatcctttc
gttgtatgcggagcgacatacgtcccaatctatagagggcagagagatgtaacctgccca
tactgcaccacacattttgttccatctcagcaagggcagctatgcactgtttgtgatctt
gcggcagtaggagcagatgcatctggcttgttttgttctccttctcagatgagatga
DBGET
integrated database retrieval system
