Salvia splendens (scarlet sage): 121807796
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Entry
121807796 CDS
T07627
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121807796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sspl03041
]
121807796
Spliceosome [BR:
sspl03041
]
Complex A
U1 snRNP components
U1 related factors
121807796
Complex B
121807796
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
121807796
NCBI-ProteinID:
XP_042064046
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All DBs
Position
6:38388862..38394112
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AA seq
907 aa
AA seq
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MADSTPAPETTAAAASHTSDVHQPEPESRPPQPDPSSTSLPPFPNPTPSGPLPPPLPAMQ
PSFRPAGALFPLPTGAAAPQFSHVPYQAPAFPPPGVVPAPAPPYVMAGQPMRYGPPMSNG
YPGMPHQGAMPPGVPHYPSPYAQMLRPAFPSRPLVGVMPPLARPPVIGIRGPIVPPVVRP
ITPNATSAEDPQTTVYVGKISSTVENDFMLSLLQLCGPVKNWKRPQDPTGTLKGFGFCEF
ESAEGVLRALRLLNKLRVDGQELLLNVNQTTRKYLERYVDKKIEGSKAKESATDGSDKEE
ERESSIDTEKIVKSTEESLKPSSDEPKKDNSEMNKENPDAGSFGLVTDEDRDADRDASEK
LTGMIEERLKNKPLPPPPPSPQTLIDGPGKSNSEQPSGSKDRESEDGVKNDTEDKNEDDK
TAESKPSSEPDRAGTGSPDRSRRHDRIRDRDRDPRRERERELERYEREREHDRAKREKDR
ENRSREDERRYKAREKEWESREKEKEHWRKREREREKDRAYERKWEVMDQERDGDDGYGK
KRKYKVSDEERKRRQREKEEDLADRVREEEEIAEAKLRAEEEQKKQLEAQKAESIPPANG
FEKAILPNEIDTENQGKADQTVELKPSPETYEVTAEGILQNGTRDLSNSASDIRQNNNAP
TKKLGFGLSGSGKRATVPSFFNEDEDEDAHKEKKMRPLVPIDYSTEEQEAIQSSMSEAPS
SNMAAAAEFVKRISTVNPRELDGEKDKSRRSHERSGQRDRDRHEEENNSIREESRRDHFE
RERSNKTKTPENQKLLDAKQLIDTIPKTKDELFSYEINWAIYDQNVLHERMRPWVSKKIT
DFLGEEEVTLVDYIVSSTQEHVEAGEMLERLQTILDDEAEMFVLKMWRMLIFEIKKVETG
LTPKPRA
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcaacgccagcgccggaaacaaccgcggcggccgccagccacacttccgat
gtccatcagcctgaaccagaatctcgacccccccaacccgatccatcttccacatcgctt
cccccatttccaaaccctacccctagcggccctctccctcctcctctaccggcgatgcag
ccttccttccgccctgctggcgctctatttccattgcctaccggcgccgctgccccgcaa
ttctcacatgttccgtatcaagctcctgcctttccacctccgggagtggtaccggctcct
gcgcctccttacgtcatggccggtcagcctatgagatacgggccacctatgtcgaatggc
taccctggtatgccccaccaaggtgcaatgcctcccggggtacctcattatccttctcct
tatgcacaaatgcttcggccagcatttccttcgcgtcctttggttggtgttatgccacca
ttggcacgccctccagttattggaattcgtggtccaattgttcctcctgttgttagaccc
attacaccaaatgccacatctgcagaggatccacagacgactgtttatgttgggaagata
tcatcaaccgtggaaaatgatttcatgctgtctctcctgcagctctgtgggcctgtaaag
aattggaaacgcccacaagaccccaccggaactttaaaaggttttggattttgtgaattt
gagtctgctgaaggagttcttcgggcattgcgactacttaataagctaagagttgatgga
caggagttgttgttaaatgttaatcaaacaactcggaaatatcttgagcgttatgtagac
aaaaagatcgaaggttctaaggccaaggaatctgcaactgatggttctgacaaagaggaa
gaaagagagtcgagcattgatactgaaaaaattgttaagtcgactgaagagtctctaaag
ccttcatcagatgaaccaaaaaaggataacagtgagatgaataaggaaaatcctgatgct
ggcagttttggccttgtaactgatgaagacagggatgcagatcgtgatgcttctgagaag
ctcacaggtatgatagaggaacggcttaagaacaaaccacttcctcctccacccccatcc
ccacaaacacttattgatggacctggaaagtcaaactcggagcaaccttctgggtcaaag
gatagggaatcagaagatggggtgaaaaacgacacagaagacaaaaatgaggatgataag
actgctgagagcaaaccgtctagtgaacctgatagagctggaacaggttctcccgatagg
agcagaagacatgataggatcagggatcgagaccgtgacccaagacgagaaagagaaagg
gaacttgaaagatacgagagagagcgggagcatgaccgagcaaagagggagaaagataga
gaaaataggagtcgcgaagatgaacggaggtataaagcgcgtgaaaaagagtgggagtcg
agagaaaaagagaaggagcattggcggaagagagagcgagaaagagagaaagatagggct
tatgaaaggaaatgggaagttatggaccaagaacgtgatggtgatgatggatatggaaag
aagaggaaatacaaggtaagtgatgaagagaggaaaagaagacagagggagaaggaagag
gacctggctgacagagtgagagaggaggaagaaattgcagaagctaaattaagagctgaa
gaagaacagaagaaacagctggaggctcagaaagcagaaagtattccaccagctaatgga
tttgagaaagctatcttgccaaatgaaattgatactgaaaaccagggtaaggctgatcag
accgttgagctcaaaccaagtcccgagacttatgaagttacagctgaagggattctgcag
aatggcaccagggatttatctaattctgcttcagacattcggcaaaataacaatgcgcca
acaaaaaagttggggttcgggctttcagggtcgggaaagcgagctactgtaccttcattt
tttaacgaggacgaggatgaggatgcacacaaggaaaagaagatgagacctctagtccca
attgattactcaactgaggaacaggaagctattcaatcttccatgtctgaagccccatca
tctaatatggctgccgcagcagaatttgtgaagcgtatttcaactgttaatccaagagaa
cttgatggagaaaaagacaaaagtaggcgttctcatgagagatctggccagcgtgaccgt
gatagacatgaggaagagaacaatagcatccgtgaggagagcagaagagatcattttgaa
agagaaagatcaaataaaacaaagaccccagaaaaccagaagcttctggatgctaagcag
ttgattgacactatcccaaagaccaaagatgagctgttctcctatgagatcaactgggcg
atctatgatcagaatgtgctgcatgaaagaatgagaccatgggtgtcaaagaagataaca
gactttttgggtgaggaagaggtcacacttgtggactatattgtttctagcactcaggag
catgtagaggcaggtgagatgcttgagaggctccaaactatcttggatgatgaagctgaa
atgtttgtgctcaagatgtggagaatgcttatttttgagatcaagaaggtagagactggc
ctgactccaaagcccagggcctga
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