Salvia splendens (scarlet sage): 121807809
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Entry
121807809 CDS
T07627
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03440
Homologous recombination
sspl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
121807809
03460 Fanconi anemia pathway
121807809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspl03032
]
121807809
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121807809
Enzymes [BR:
sspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
121807809
DNA replication proteins [BR:
sspl03032
]
Eukaryotic type
DNA Topoisomerases
121807809
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
121807809
FA (Fanconi anemia) pathway
121807809
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
121807809
NCBI-ProteinID:
XP_042064077
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Position
6:complement(2827827..2835715)
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AA seq
857 aa
AA seq
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MAPKVLMVAEKPSIALSIATVLSGGRMSTRRVSTEVHEFEGKFLGFPVLYRVTSVIGHVF
SLDFHGRYQDWNATNPLDLFDAPTVKAESTPKAHIVRHLNQEARGCGHLVLWLDCDREGE
NICFEVIESTGFQSKDGKKIYRARFSSVTEKDILNAMSNLVEPNKNEALAVDARQEIDLK
VGVAFTRFQTSYFNGKYGNLDSRVISYGPCQTPTLGFCVQRHLDISTFKPEKFWALHPYI
LHQGYELKLQWERHRLFDSDTAHMFQNIVKEDGRLKVIRISEKQESKSRPSGLNTVKLLK
IASSAMGLGPQLAMQLAERLYTQGYISYPRTESTAYPSSFDYKGTLGALARNPEFGNYVQ
LLLSDGYHKPRSGTDVGDHPPITPMCSATEDMLGHDSWKLYQYICQHFLGTLSPECKYIK
RTVEFESGGESFHCVGQHVTTKGFTSIMPWLAVSEKNIPQFTEGKKIDIARIEVEEGSTQ
PPDYLTESEVISLMEKNGIGTDASIPVHINNICERNYVQVQAGRRLVPTVLGISLIRGYQ
CIDPDLCLPDIRSFIEHQIGLVAKGQADHSLVVQHVIEQFRRKFTYFVKQIEDMDALFEA
EFSPLSDTGRVLSKCGKCLRYMKLIASQPSRLYCGTCEEIYYTPQKGTIKLYKELTCPLD
NFELLIFSLPGPEGKSFPFCPYCYNSPPFEGIGNLYGAAKTAGAVTLGKGAGMPCFQCPH
PTCPHSMISQGVCACPECDGTLVLDPVSAPKWRLYCNMCNCFVSLPEGAHRISTTKDHCP
NCDSTILEVDFNKKTTPLKDGGTLHVGCILCDELLHSLVEMKHGRSFFRNRGRGRGRGRR
GRGNRKQQDPKMSFRDF
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaagttctaatggtagccgagaagccgagcattgctctttcgattgctaca
gttctttccggcggtcgaatgtcaacaagaagggttagcactgaggtccatgagtttgag
gggaagtttctgggatttcccgtgctgtatagagtaacatcagtgattggtcatgttttc
agtctagattttcatggacgttatcaggactggaatgctaccaatcctttggatctcttc
gatgcaccaactgttaaagcagaatccacaccgaaggctcatattgttaggcatttgaac
caagaagctcgtggttgtgggcacttggtactgtggctggattgtgaccgtgagggagaa
aatatatgctttgaagtaattgagtccactggtttccagtcaaaggatggaaaaaagatt
tatcgtgctagattttcatctgtaactgagaaggatattttgaatgccatgagtaacctt
gttgaacctaacaaaaatgaggcactggctgtggatgcacggcaagagatagatctcaaa
gttggagttgccttcacacggtttcaaacgagctatttcaatgggaaatatggaaacctt
gattcacgagttatttcttatgggccgtgtcaaactccaactctaggcttttgtgtgcaa
cgacacctagatatttccacttttaagccagaaaagttttgggcattgcacccttatata
ttacaccaagggtatgaactaaaattacagtgggagcgccatagactatttgattcagat
acagctcatatgttccaaaacatagtaaaagaggatggaaggctgaaagttattcgtata
tcagaaaaacaggagtcgaaaagtcgcccttctggtctcaatacagtaaaacttctgaag
atagcttcaagtgctatgggcctgggtccgcagctggctatgcaattggctgagcgttta
tatacccaaggttacatcagctatccccgaacagagagcactgcgtacccatcttccttt
gattacaaaggtacacttggagcactagccaggaatccagaatttggtaattatgtgcag
ttgcttctgtctgatggctatcacaagccgcgatctggaactgatgtaggcgatcatcct
ccaataactccaatgtgttcagctacagaggatatgctagggcatgattcatggaaactc
taccagtatatttgtcaacattttctgggaactctttctcctgaatgcaagtatatcaag
agaacggttgaatttgaatctggtggcgaatcattccattgtgttgggcagcatgtaaca
accaaaggattcacatccattatgccatggctggcagttagtgagaaaaacataccccag
tttactgaagggaaaaaaattgacatagctcgaattgaagtagaagaggggagtacacag
cctccagattaccttactgaaagtgaagttatctctttgatggaaaagaatggaatagga
acagatgcatccattcctgtacacattaataacatatgtgaacggaattatgtacaggta
caagctggaaggagattggttcctactgttttgggtatcagcttaataagaggctaccag
tgcatcgaccctgatctctgtttgcctgatattcggagtttcatcgagcatcaaattggc
cttgttgctaaaggtcaagcagaccattctttagttgtacagcatgtgatagagcagttt
cgaaggaagtttacctactttgtcaagcagattgaagacatggatgcattatttgaagca
gaattttctccactctcagacactggacgcgtgcttagcaaatgtggcaaatgtttgcgg
tacatgaagctcattgcttcccagccatcacgtttatattgtgggacgtgtgaagaaatt
tattacactcctcagaagggtacaatcaagctgtacaaggaactcacctgccctttggat
aactttgagcttttgatcttctcattgcctggtccagagggcaaatcctttcctttttgc
ccatactgttacaacagccctccatttgaagggattggtaatttatatggtgcggctaag
actgctggtgctgtcacattgggcaaaggagccggcatgccatgtttccaatgcccacat
cctacatgcccgcactctatgatatcccaaggtgtttgtgcttgtcccgagtgcgatggc
acactagtgctcgatccagtcagcgcacccaaatggaggctctactgcaatatgtgcaac
tgtttcgtttcccttcctgagggcgctcataggatctcgacaaccaaggatcattgccct
aattgtgactccaccatcttggaggtggacttcaacaagaagaccacccctttgaaggat
ggaggcacactgcatgtcgggtgcattctgtgcgatgaactactgcattcgctcgtggag
atgaagcacgggaggtcgtttttcaggaacaggggaaggggccggggaagaggacggaga
ggaaggggcaacaggaaacagcaagatcccaaaatgagtttccgtgatttctga
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