Salvia splendens (scarlet sage): 121807874
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Entry
121807874 CDS
T07627
Name
(RefSeq) cell division control protein 48 homolog C-like
KO
K14571
ribosome biogenesis ATPase
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121807874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121807874
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121807874
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
TIP49
AAA_16
AAA_14
AAA_22
AAA_2
RNA_helicase
AAA_17
Nucleolin_bd
Vps4_C
AAA_28
AAA_33
NPHP3_N
Rad17
AAA_18
nSTAND3
Parvo_NS1
IstB_IS21
Mg_chelatase
AAA_3
Viral_helicase1
Bac_DnaA
ABC_tran
AAA_19
NACHT
TsaE
NB-ARC
ATPase_2
Zeta_toxin
AAA_11
TTC3_9th
CPT
Motif
Other DBs
NCBI-GeneID:
121807874
NCBI-ProteinID:
XP_042064154
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All DBs
Position
1:2477366..2482640
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AA seq
810 aa
AA seq
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MGRRRGGGSSGKLHSNNDRILRRHIESAGKNYSTVDELVDHLRSSYPHYSRHKLRPFTKQ
VERVIAVHDMDHSNDSDTPILNKRRKIDDKEQELLQIEAEHLRRQSSDAIDGCSLSSLAS
PYSSGVGSSFNEEASEDPVYGEKVEPEFDLMKSMLREGLRRKSEKHGVGRAVYKESIELE
VVDNKGMKEVNLMTEQSKLGHDVNRNDSKNVNKNQSNHIGGKDWDVITEAMFKDLGGISE
VIEELKTGVILSLCQPHVDHHVGVKPMGGILLHGPPGCGKTKLAHAIANETGVPFYKIGA
TQLLSGVAGESEGNIRELFRKAYRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMIS
MDESHVPVEPAGNDATSASSNSRPGYVLVIGATNRPDAIDPALRRPGRFDREIALGVPNE
AARIEILSMQTRNLRLEGAFDFKKIARLTSGFTGADLTAIADMAGHLAKKRFASKKRDEF
SKEEKDEDHSEDWWKLLWSDEELENLFVTMADFEDAAKTVQPSLRREGFSGVPNVNWDDV
GGLHFLREEFDHHIVRRIKFREAYQAFGLDLATCFLLYGPPGCGKTLIAKAVANEAGANF
IHIKGPELLSKYVGETELAVRTIFSRARTCSPCIIFFDEVDALTTKRGREGGWVVERPLT
QLLIEMDGSEPRRDVYVIGATNRPEVMDEAMLRPGRFEKLMYVPLPSPDERGMILKALAR
NLPIDANVDLMALAKHSGCDKFSGADLLSLMHGAGTAAVREQLSSMDTISSIQSTIKETH
FMSALAKISPSVSEEKIQEYERFLEKFKAQ
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggcgacgcggcggtggcagctctggaaaactgcattcgaacaatgaccgaatt
ctccgccgccacattgaatccgctgggaaaaactactcgaccgtcgacgagctggtggac
cacctccgctcctcctacccgcactactcccgccacaagctccggccgttcacgaagcag
gtggaaagagtaattgcggttcacgatatggaccactcaaacgacagcgatactccaatc
ttgaacaaacgaaggaagatagacgataaagagcaggagctgcttcaaattgaagcggag
cacttgaggcgtcagagcagcgacgcaatcgacggctgctcattgtcctcgttggcgtcg
ccttactcttccggagtcggcagttcttttaatgaagaggcgtcggaggaccccgtgtac
ggggagaaggttgagccggagtttgatttgatgaagtcgatgctgagggagggtttgcgt
cggaaatcggagaaacatggggtgggaagagctgtttataaggagtctattgagctggaa
gtggtggataacaagggtatgaaggaggtgaatttaatgactgagcaatctaaattaggt
catgatgtcaataggaatgatagcaaaaatgtgaataaaaatcaaagcaatcacattggt
ggaaaggattgggatgtgattactgaggcaatgtttaaggatttaggtgggattagtgaa
gtgattgaggagttgaagacgggtgtcatcttgtcgttgtgtcagccacatgtagatcac
cacgtcggggtgaagcccatgggggggattttattgcacgggccgccgggttgtgggaag
acgaagttggctcatgccattgccaatgagacgggagttccattttacaaaattggtgcc
actcaattgttgtctggagttgctggtgaatcggaagggaacataagagagttgttccga
aaagcatacaggacagcaccatctatagtcttcattgatgaaattgatgcaattgcttca
aaaagggaaaacttacagagggaaatggagaaacgcatcgtgacacagttgatgattagc
atggatgaatcacacgtgcctgtagaacctgctggcaatgatgcgacttctgcaagctct
aatagcagaccaggctatgtacttgtgattggagcaacgaatagaccagacgccattgac
cctgcattgaggaggcctggtcgatttgatcgcgaaattgcgttaggtgttcctaatgaa
gctgcccggattgaaatactctccatgcaaacaaggaatcttagacttgaaggtgctttt
gattttaagaaaatagctagattgacttcaggttttactggagcagatttgacggcaata
gctgacatggctggtcaccttgcaaagaagagatttgcaagcaagaaaagggatgagttc
tccaaagaagagaaggacgaggatcatagcgaagattggtggaagttgctttggtcagat
gaagaattggagaatctctttgtaaccatggctgattttgaggacgctgctaaaacggtc
caaccttctctgagaagagaaggattttctggcgtaccgaatgtgaactgggatgatgtt
ggcggcctgcattttctaagagaagagtttgaccatcatatagttagacgtataaaattt
cgggaagcttatcaggcttttgggttggacttagcaacttgctttttgctttacggccct
cctggctgcggaaagacgttgatcgccaaggccgtggctaatgaagcaggagccaatttt
atacacattaagggtcctgaactcttgagtaaatatgtgggtgaaactgagttggcagtc
cgcacaattttcagtcgagcaaggacatgttctccatgcataattttcttcgacgaggtg
gatgcactgacaacaaagcgtggtcgggaagggggatgggtcgttgagcgacccctgacc
cagctgctgatagaaatggatggctcagaaccgagaagggatgtttatgtaattggtgct
acaaataggcctgaagtgatggatgaggcaatgctccgaccaggaaggttcgaaaagctt
atgtatgttcccctccctagtccagacgaacggggaatgatcttaaaagcccttgctcgg
aatttgccaattgatgccaatgtggacctcatggctctagccaagcacagtggatgtgac
aaatttagtggcgctgatctcctctctctgatgcatggagctggtacggctgcggtaaga
gaacaactatcatcaatggatacaattagtagcatacaatcgacgatcaaagagacacat
tttatgagcgcgttggcgaaaatctcgccgtctgtgtccgaagagaaaatacaagaatac
gagcgttttttggaaaagttcaaagctcaatga
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