Salvia splendens (scarlet sage): 121807965
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Entry
121807965 CDS
T07627
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121807965
Enzymes [BR:
sspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121807965
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121807965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
DUF3302
Col_cuticle_N
zf_RING_Vps8_fungal
zf-ANAPC11
Epiglycanin_C
zf_RING_Vps8
TMEM154
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
121807965
NCBI-ProteinID:
XP_042064236
LinkDB
All DBs
Position
6:complement(9606152..9608944)
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AA seq
323 aa
AA seq
DB search
MNKNRRTKSTAQPLFYSSTTDYQMSKFFIFTLLLCFLTDPILSIVQLSSISTSFPDTPAR
FTAGLNGSAICGGLWVAEPLDACSPLLDEVEDGRDENANIVLIVRGNCAFDEKIRNAQEA
GFHAAIIYDDKLNHNLISMMGNHEGLWIYAVFVSNTAGETLRENARGVGGECCIISLVDE
TAWTVLVISFISVLAVICLLVSICFTINQWRNHQETRTTAADDSVVDMLPRITFGSVNLS
APIGETCTICLEDYKHGESLKILPCRHGFHSSCVGSWLTKCAAFCPVCKHDLSGNNGLKS
ARRTYWFSSRVKIITRKLDILKD
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaacaggagaacaaaatcaacagcacagccccttttttattcatcaacaacg
gattatcaaatgagcaaattcttcatcttcacacttcttctctgcttcttaaccgatccg
attctctcaatcgtccagctcagttccatctccacttcgttcccggacactcccgccaga
ttcactgcaggtctgaacggtagcgcaatctgcggcggcttgtgggtggctgagccactc
gacgcctgctcgccgctgctcgatgaagtcgaagacggccgtgatgagaatgcgaatatt
gttctgattgtgaggggaaattgcgcgtttgacgagaagatcagaaatgcgcaggaagct
gggttccacgccgccatcatatacgatgataagctcaaccacaacctcatctcaatgatg
ggaaaccatgaaggactgtggatatatgctgtatttgtgtcgaacacagcaggggagacc
ctcagagagaatgctcgaggagtgggaggcgaatgctgcatcatctcacttgttgatgaa
actgcctggacggtgctggttatatcgtttatttcagtccttgctgtaatctgtctcctg
gtttcaatctgcttcacgatcaatcagtggaggaatcatcaagagactcgaactactgct
gccgatgatagtgttgtggatatgctccctagaataacatttggctccgtgaatctatcc
gcccccataggagagacatgtacaatctgtctcgaggactacaaacatggggaaagcctg
aaaattcttccttgccggcatggtttccactcgagttgtgtaggttcatggttgacgaag
tgtgccgcattctgtccagtctgtaagcatgacctgtcaggcaacaatggtcttaaaagt
gcacggaggacgtactggttttcttctcgagtcaagatcatcacgagaaaacttgatata
ctaaaagattga
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