KEGG   Salvia splendens (scarlet sage): 121808017
Entry
121808017         CDS       T07627                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A-like
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03020  RNA polymerase
sspl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121808017
  09124 Replication and repair
   03420 Nucleotide excision repair
    121808017
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sspl03021]
    121808017
   03400 DNA repair and recombination proteins [BR:sspl03400]
    121808017
Transcription machinery [BR:sspl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     121808017
  RNA polymerase III system
   RNA polymerase III
     121808017
  RNA polymerase I system
   RNA polymerase I
     121808017
DNA repair and recombination proteins [BR:sspl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      121808017
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat PK_Tyr_Ser-Thr NA-iREase1
Other DBs
NCBI-GeneID: 121808017
NCBI-ProteinID: XP_042064290
LinkDB
Position
6:complement(1358586..1361786)
AA seq 205 aa
MVLPEDEVRRLFRAMKTVLQMLRDRGYVVTDDEIAMTMEGFTAKYGHNMKREDLMLVKAK
RDSGEQIYVFFPDEAKVGAKTIRTLICRMNDDNVTRAILVSQQNLTPFAKKMIKEVAKKF
QVEVFQEAELLVNIHHHELVPPHQVLTAEEKTTLLARYTVKETQLPRIQVTDPVARYHGL
KSGDVVKIIRPSETAGRYITYRYAV
NT seq 618 nt   +upstreamnt  +downstreamnt
atggtgctgcctgaggatgaggtcaggaggttgttcagagccatgaaaacggtgctgcaa
atgctgagggacaggggctatgtggtgactgatgatgagattgcgatgaccatggaagga
ttcactgccaagtatggtcacaatatgaagagagaggaccttatgcttgtcaaagccaag
cgtgacagtggagaacagatatatgtgttctttcctgatgaggccaaggttggagctaag
acaataaggactttgatttgtcgaatgaacgatgacaatgttactcgggccatcctagtt
tcacagcagaatttgactccttttgctaaaaaaatgataaaggaggtagccaagaaattt
caggtggaagttttccaggaggctgagttgctagtcaacatccaccatcatgagcttgtt
cccccgcatcaagtcctcacggctgaagaaaagacaactctgcttgcaagatacactgtc
aaagaaactcagctgcctcgtattcaggtaactgaccctgtcgccagatatcacgggctg
aaaagtggggatgtcgtgaagatcatccgcccgagtgaaactgccggaagatacatcact
tacagatacgcagtttga

DBGET integrated database retrieval system