Salvia splendens (scarlet sage): 121808071
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Entry
121808071 CDS
T07627
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspl03009
]
121808071
Enzymes [BR:
sspl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
121808071
Ribosome biogenesis [BR:
sspl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
121808071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
TRM5-TYW2_MTfase
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
121808071
NCBI-ProteinID:
XP_042064346
LinkDB
All DBs
Position
6:complement(30004728..30010385)
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AA seq
615 aa
AA seq
DB search
MAGPKLNKKRGGRAANPPPKKKQKALPTLEKETKEEMIFDSDGSEEPEVLENSDEEDQGM
DSLSDMSSDGDDVYANDILQGSDDEEGSGEEERGAQGDSDSDVSDFEKEAREIDEEKARE
EVDAEAELELNIKNEANEFALPTEEELEEEAQRPPDLSNLLRRIKEIVRVLSNFKSLRQE
GATRKDYVDQLKMDLISYYGYNDFLIEALVELFPAVELMELIEAFEKPRPICLRTNTLKT
RRRDLAGVLLNRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGHYMLQGASSFLPVMA
LAPQEKEKVVDMAAAPGGKTTYIAALMKNTGMIYANEMKESRLKSLTANIHRMGVTNTIV
SNYDARELPKVLGSNSVDRILLDAPCSGTGVISKDESVKTSKSALDIQNCAHLQKQLILA
AIDLVDANSKSGGYIVYSTCSIMVAENEAVIDYALKKRDVKLVPCGLDFGRPGFIRFRGH
RFHTSLDKTRRFYPHVHNMDGFFVAKLKKMSNMKPTSQQSDDGEVEEEESELVESNDQEE
GVKEKKQFNKGSNEIATEKVIKEKKQLNKGSSVSGAGKQPPLMEKRKKKEWPSREEIAKN
REEKRQALRESKRKR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggctggtccaaaactcaacaagaagaggggaggtagagcggctaatcctccaccgaag
aagaagcaaaaggcattgcctactttagaaaaagaaactaaggaggaaatgatatttgat
tctgatggctctgaagagccagaagtgcttgagaactcagatgaggaagatcagggaatg
gactctctctcggatatgtcatcagatggtgatgatgtctatgccaatgatatcctccaa
ggaagtgatgatgaagaggggagcggtgaagaagagcggggagcacagggggactcagat
tctgatgtatctgattttgagaaggaagcaagagaaattgacgaggaaaaggcacgggaa
gaagtagatgcagaagcagaattagagctcaacataaaaaatgaagctaatgagtttgct
ttaccaactgaggaggagcttgaagaggaagcacagagacccccagatttgtccaatctt
ctaagaaggataaaagagattgtacgagtgctttcgaatttcaaatctttgaggcaagag
ggtgctacacgcaaagattatgtcgatcaattgaaaatggatttaatttcttactatgga
tacaatgattttttgattgaagctctggttgagttgtttccggctgttgaactcatggaa
ctcattgaagcttttgagaagcctaggcctatctgtcttcgtactaacactttaaagact
cgacgaagggacttggcaggtgttcttttaaacagaggagtcaaccttgatccattaagc
aaatggtccaaagtaggattagttgtgtatgattcccaagttccaattggggccactcca
gaatacatggctgggcattatatgcttcaaggtgcaagctcttttttgcctgtaatggca
cttgctcctcaggagaaagagaaagttgttgacatggcggctgcgcctggtggtaaaact
acttacattgcagctctgatgaaaaatactggtatgatctatgcaaatgagatgaaggag
tcgagactcaaatcactcactgcaaatatacatcggatgggtgtaacaaacaccatagtt
tccaactatgatgcgagggagttgcctaaagtcctgggaagcaactctgtcgataggatt
ttattggatgctccttgcagtgggactggtgttatatctaaggatgagtctgtcaaaacc
tcaaaaagtgctttagacatacaaaattgtgctcatcttcagaagcaattaatactggct
gcaatagatcttgtggatgccaattcaaagtctggaggttacattgtctattccacatgt
tccattatggttgctgagaatgaagcagtcattgattatgcactcaagaagagggatgtt
aaacttgttccatgtggccttgattttggacgtcctggattcattcgcttcagagggcat
cgttttcacacttccttggacaagacaaggcgcttttatccccatgtccacaacatggac
ggattctttgtagctaagctaaagaaaatgagtaacatgaagccaacatctcaacagtct
gacgacggagaggtggaggaggaggaatctgagttggttgaaagcaatgaccaggaagag
ggtgtcaaagagaagaaacagttcaacaaaggctctaatgaaattgccacagaaaaggtt
attaaagagaagaaacaattgaacaaagggtctagtgtaagtggggcagggaaacaacca
cctttgatggaaaagagaaagaaaaaggaatggccttcaagagaggaaattgcgaaaaac
agagaagagaaacggcaggctttaagggaatcaaagagaaaaaggtaa
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