Salvia splendens (scarlet sage): 121808085
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Entry
121808085 CDS
T07627
Name
(RefSeq) elongator complex protein 1-like isoform X1
KO
K11373
elongator complex protein 1
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspl03016
]
121808085
Transfer RNA biogenesis [BR:
sspl03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
121808085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EML_2
TPR_IFT80_172
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
121808085
NCBI-ProteinID:
XP_042064359
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All DBs
Position
6:complement(27572553..27578569)
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AA seq
1322 aa
AA seq
DB search
MKNLKFSWEVWSEVQLRKEQGDESLRLATFDIERSRLFFASTANFIYTTQLPSPQTEGAW
NKSSAPAATRLDLETGDVITCLDYLMEKESLVIGTSRGHLLLYSVDDGVTEIVGQVEGGV
ACISPSPDGDLLAIMTGFGQILVMNLDWDLLYEMPLDDAPEGVDVPDGSAFSVDCFSEAS
ISWRGDGKFFASLSKVHDSLSFHKKLKVWERDSGALHSVSDPKPFMGSVIDWNQIGAKIA
TMYDQNEEKKCPSIVLYEKNGLERSSFSINEGIDVTVEFLKFNCNSDLLAAVVRGETVDT
LKIWHFSNNRWYTKQEIRYSKEDGIKFMWDLTNPLKLICWSLDGRIITCKFVWVTAVMGN
SIAFVIDGSKVLVTPFSLSLMPPPMYFLEFEFPCAVRDITTYSRTSNNRLAASLSDGSLC
IVELPLLDEWDELEGQTFRVEASDSGINIGPLLHLAWLDSHTLLGVSTLDSSHSNFSNRN
FLDGDVRTRHYLHGIEISCSEDRVSGSMTCSGWQAEALNHMHLEGVVAGIVCNPLTSCSA
FVQFEGGKIFECTSKLGVNRGVSLQRCDEMDFLSSCPWMDIAPVEGHTREKPLLLGLDDN
GKLHLEGRILCNNCSSFSTYSSSGDGMITHVVITTKQDLLFIVDVGDIVRGELEKNYENF
QPVVAKNRKGENESIFINTWEKGAEIVGVLHGDGSAVILQTTRGNLECVYPRKLVLVSII
NVLANRRFKDALQMVRRHRIDFNIIVDHCGWQTFTELAADFVVQVGNLNYVTEFVCAIKG
EDVMETHYKDYTSLPCIKRDKVVRYGESKSADGDNKVSSVLLAVRNALEDKIEETPAREL
SILTTLARSSPPALEEALRRIKIIRELELSAANDTKRPYPSSEESLKHLLWLSESEAVFE
AALGLYDLNLAAIVALNSQKDPKEFLPLLQELECMPKLLMQYNIDLKLQRYESALRHIVS
AGDSYYEDSLNLMSKVPELYPIGLQLITSDKKQQVLEAWGDHLNATKCFEDAATTYLCCP
CLEKALKAYRAGGNWTGVLTVAGLMKVGKDDLLQLARELSEELQALGKPRDAAKILLEYC
CDVYNGVSLLVDARSWEEALRIAFLHRRDDLVLVVKDASLDCASVLMGEYNEGVEKVGKY
LTRYLAVRQRRLLLAATIKSEERLEGYLDDETASQASSNFSGMSAYTTGSRRGSTAPTSI
STSTKGRDRQRNRGKIRAGSPDEEAALVEHLKGMSLAEGAKHELKSLLICLVMLGEEDTA
RKLQHTAEKFQVSQTAAVKLADDLMPIDSIDEQAFNLEIYIQTVQKEVQNSDAFSWKSKV
LG
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctcaagttttcttgggaggtttggtcggaggtgcagctgagaaaggagcag
ggtgatgaatccctgcggttggccaccttcgacatcgagcgcagccgcctcttcttcgcc
tccaccgccaacttcatctacactactcaacttccttcacctcagactgagggagcatgg
aataagagctcagcgcctgctgcaactcggttggatttggaaactggagacgttatcaca
tgtttggattatctcatggaaaaggaatctttggtgattggaacatcgagagggcatctg
ttgctgtattcggttgatgatggtgtaaccgaaattgtaggccaggtagaaggtggagtt
gcgtgtatttctccgagtccggatggggatttacttgctataatgactggttttgggcag
atcctagtcatgaatcttgattgggatctattgtacgagatgcctcttgatgatgcaccc
gaaggtgttgacgtaccagatggatcagccttttcagttgattgtttctctgaggcctca
atttcatggagaggtgacgggaagttttttgcttcactgagcaaggtccatgattccttg
tccttccacaagaagcttaaagtatgggagcgtgattctggtgctctccactctgtctca
gacccaaagccgttcatggggtctgttattgactggaatcagattggggctaaaattgcc
accatgtatgatcagaatgaagagaagaaatgtccgtctatagttctgtatgagaaaaat
ggtctagagaggagctcattcagtatcaatgagggaatagatgtaactgtagaatttctt
aagttcaattgcaattcagatcttcttgctgctgttgtcagaggtgaaacagttgatacc
ctgaagatatggcactttagcaataaccgctggtatacgaagcaagagatcagatattcc
aaggaagatggaataaagtttatgtgggacttgaccaacccactaaagttgatctgttgg
agtcttgatggcagaatcataacctgcaagtttgtctgggttacagctgtgatgggaaac
tcaatagcatttgttattgatggctcaaaagttttggtgaccccattttctttgtccttg
atgccacctcctatgtactttcttgaattcgaatttccctgtgccgttagggacattact
acttattcaagaacttccaataatcgtctggctgcatctctatcagatggaagcttgtgc
attgtggagcttcctttgcttgatgaatgggatgagctggaaggccagacattcagagtt
gaggcttcagactctggtataaacattgggcctttgctgcatcttgcttggttggattcc
cacacacttcttggtgtttctactttagattccagtcacagtaattttagtaacagaaac
ttcctagatggggatgttcgtacaaggcattacttgcatggaattgagataagttgttct
gaagatcgcgtttctggttccatgacatgctcaggatggcaagcagaagctctgaatcat
atgcatcttgaaggggttgttgctggcatagtgtgtaatccactcactagctgctctgca
tttgttcagtttgaaggtggaaaaatatttgagtgcacgtcaaaattaggtgtgaacaga
ggggtcagtcttcagagatgtgatgaaatggatttcctatcgtcctgcccatggatggat
attgccccagttgaagggcatacgcgagagaaaccattgcttttaggtcttgatgacaat
ggaaaactgcatcttgaaggaagaatattgtgtaacaattgcagtagcttttcaacttac
tcaagttcaggtgatgggatgataacacacgtggtaatcaccactaaacaagatttacta
tttattgttgatgttggtgatattgtccgtggggaactggaaaagaattatgagaatttc
caacctgttgtagcaaagaatagaaaaggagaaaatgaaagcatttttattaacacatgg
gaaaaaggagcagaaattgtaggagttcttcatggtgatgggtctgctgtgatattacaa
actactcgaggaaatcttgaatgtgtgtatcccaggaaattagttcttgtttcgataatc
aacgtgttggctaataggcggtttaaagatgccttgcaaatggtaagaaggcacaggatt
gattttaacatcattgttgaccattgtggttggcaaacctttaccgagttagctgcagac
tttgttgtacaggttggcaacctgaattatgtaactgagtttgtttgtgccattaaaggt
gaagatgttatggagacacattataaagattatacatccttaccatgcatcaagagggat
aaagttgtgagatatggtgaatcgaagagtgcagatggtgataataaagtatcctctgtt
ttattggccgtgaggaatgctcttgaggataaaattgaggaaactccagcaagagagctt
agcattctgaccaccttggctagaagtagccccccagctctggaggaggctttgaggaga
ataaagattatccgagaactagagctttctgcagctaatgatacaaaacgaccttatcct
tcatcagaggaatccttgaagcatttgctatggctttctgagtcagaggcagtttttgaa
gctgctttaggcctttatgatttaaatcttgctgctattgttgcgttaaattcacaaaag
gacccaaaagaatttctgccccttctacaagaattagaatgtatgcctaaacttttgatg
caatataacattgaccttaaattacaaaggtatgaaagtgctctaaggcacattgtttct
gctggggactcttattatgaagattccttgaatctaatgagtaaagtcccagagctttat
ccgattggacttcagttgattacttctgacaagaaacaacaggtgcttgaagcatggggt
gatcatcttaatgccacaaaatgctttgaggatgctgctaccacatatttgtgttgccct
tgtttagagaaggcactgaaggcatatcgtgctggtggtaattggactggggttctgact
gtggctggccttatgaaggttggaaaggatgatcttctgcaactggcacgtgagctgagt
gaggaacttcaagcacttggtaaacccagggatgcggcaaaaatactcttggagtactgc
tgtgatgtttataatggtgttagcctcttggtggatgcaaggagttgggaagaggcatta
aggattgctttcttgcacagaagagatgatctagttttagtagtgaaggatgcttctcta
gactgtgcaagcgtgctgatgggagaatataatgaaggggtggagaaggttggaaagtac
ttgacccgttacctagcagttcgccagagaagattattacttgctgcaacaattaaatca
gaggagagattggagggctatcttgatgatgaaactgcttcacaagctagcagtaatttt
agtggaatgagtgcatacaccaccgggtcgagaagaggttcaactgctcccacgtctatc
agcacgtccactaagggaagagatcgccaacggaacaggggcaagattagagctggaagt
cctgatgaggaggcggctttagttgagcatttgaaggggatgtctctggctgaaggagca
aaacacgagctcaagtctttattaatttgcctcgtgatgctcggggaggaagacactgca
aggaaactgcaacacactgcggagaagtttcaagtgtctcaaactgcagcagtgaagttg
gcagatgatttgatgccaattgacagcattgatgagcaggccttcaatctggagatttac
attcagactgtgcagaaagaagtgcagaattcagacgcattctcctggaaatcgaaggta
ctcgggtga
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