Salvia splendens (scarlet sage): 121808106
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Entry
121808106 CDS
T07627
Name
(RefSeq) coatomer subunit beta'-1-like
KO
K17302
coatomer subunit beta'
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sspl04131
]
121808106
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121808106
Membrane trafficking [BR:
sspl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
121808106
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121808106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_HPS5
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Nup120_160
WD40_like
WD_LRWD1
MAGUK_N_PEST
TPR_1
TPR_GEMI5
HEAT_GCN1
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
121808106
NCBI-ProteinID:
XP_042064399
LinkDB
All DBs
Position
6:complement(34614585..34624417)
Genome browser
AA seq
915 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGIVCIWNYQTQTMVKSFEVTELPV
RSTKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAVGYSKGSRRVVIGYDEGTIMVKLG
REVPVASMDNGGKIIWAKHNEIQTVNIKTVGADYEVADGERLPLAVKELGNCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSTEGEYAVRESTSKIKIFSKNFQ
EKKSIRPTFSTEHIYGGNLLAMCSNDFICFYDWADCRLIRRIDVTVKNLYWADSGDLVTI
SSDTSFYILKYNRDVVSAHLDSGRSVDEQGVEDAFELLYEINERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLLDKEFNVVGYTLLLSLIEYKTLVM
RSDFERANEVLPSIPKEHLNSVARFLGSRGMIEDALEVATDPDYRFELAIQLGKLAIAKE
IATVAQSESKWKQLGELALSTGMLEMAEECLKQANDMSGLLLLYSSLGNTEGISELASLA
KEHGKNNVAFLCLFMLGKLEECLQLLIDSNRIPEAALMARSYLPSRVSQIVSLWRKDLSK
INQKAAESLADPEEYPNMFDDWQIACSVEANAAETRGKYPPASEYVQHADRSTASLVETF
RSMQLEELPENGDLDYEDTEQNGHDAHETQLDEQAVEGHEDGQEEPVVVDADSTDSAVLV
NGSEAEEEWVLTPSQ
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcagattagaaatcaagaggaaacttgctcaacgatcagaaagagtaaagtca
gtggatctacatccaacagagccatggatattggcaagtttgtattcagggattgtttgt
atttggaattaccagactcagacaatggttaaatcttttgaggttacagaattaccagtt
agatcaacaaaatttattgcacgaaagcagtgggttgttgctggtgctgacgatatgttc
attcgcgtgtacaattataatacaatggataaggtaaaagtgtttgaggcccatacagat
tatatcaggtgtgtggctgttcatcccactcttccctatgtgctgtcatcgtccgatgat
atgctaataaagctttgggactgggagaaggggtggttgtgcactcaaatttttgagggt
cattctcactatgttatgcaagtgacttttaatccgaaagataccaatacttttgccagt
gcttcccttgaccgcactattaagatctggaatcttggctctcctgatccaaactttacc
ttggatgcccatctgaaaggagtcaattgtgtagattattttactggtggtgataagcca
tatctaattactggttctgatgatcacactgctaaggtgtgggattaccagacaaagagc
tgcgtgcagacattagaaggccacacacacaatgtatctgcagtttgcttccatcccgaa
cttcccattatcataaccggttctgaggatggtactgtccgcatttggcatgcaacaact
tacagacttgaaaacacactgaattatggccttgaaagagtttgggcagttggctacagt
aaaggttcgagaagggtagtaatcggttatgatgaaggcacgatcatggtaaagcttggt
cgtgaagtacctgttgctagtatggacaatggagggaaaataatttgggccaagcataat
gaaattcagactgtcaacatcaagactgttggggcagattatgaggttgctgatggagag
agactacccttggcagttaaggaactgggaaattgcgatctttatccacagagcttaaag
cacaatcccaatggtaggtttgttgttgtatgcggagatggtgaatacataatatacaca
gctttggcatggagaaacagatcatttggctcggcactggaatttgtttggtcaaccgaa
ggagaatacgctgttagagaaagcacatcaaagattaagattttctccaaaaatttccag
gagaagaaaagtatcaggcccaccttttctactgagcatatatatggtggcaatttgttg
gcaatgtgttcaaatgattttatttgtttctatgattgggctgattgtaggctgatacgc
cgaattgatgtcactgttaaaaacctctactgggctgacagcggtgatttggtgaccatt
tccagtgatacatcattctacatacttaaatacaaccgtgatgttgtttctgctcatctg
gatagtgggagatcagtagatgaacaaggtgtggaagatgcttttgagcttctctatgaa
attaacgaacgagtacggactggactttgggttggggattgtttcatttacaataactct
tcctggagactcaattactgtgtgggtggtgaggtgacaacaatgtttcatttagaccga
cccatgtacctgcttggatatcttgctaatcaaagtcgtgtttatctccttgacaaagaa
tttaatgttgtcggatacacattgctactcagcttgattgaatacaagactcttgtaatg
cgtagtgacttcgaaagggcgaatgaggtcttaccatcaattccaaaggaacatctcaac
agtgtcgctcgtttcttgggatcacgaggtatgatagaagatgcactcgaagttgctaca
gatcctgattacagatttgagttagccatacagctaggcaaactagcaattgctaaggaa
attgcaacagtagcacagagcgagtctaagtggaagcaattgggtgaattagccttgtct
actggaatgctggagatggcagaagagtgcttgaagcaagcaaatgacatgagtggtctg
ttgctactctactcttctttaggcaatactgaggggatttctgaacttgcttctcttgcc
aaagaacatgggaaaaataatgttgcattcctttgtttatttatgttgggtaaattggag
gagtgccttcagctgttgattgacagcaatcggatacctgaggctgcattgatggcacgg
tcatacctcccaagcagagtgtcacagattgtttctctttggagaaaggacctcagcaag
atcaatcagaaagctgctgagtctcttgctgatccagaagaatatcctaatatgtttgat
gattggcaaattgcctgttctgttgaagccaatgctgcagagacaaggggaaaatatcct
ccagcttctgaatatgtgcagcatgctgatagatcaacagcaagtcttgtagaaactttt
agaagcatgcaactggaagaactaccagaaaatggtgacttggattatgaggatactgag
cagaacggacatgatgcacatgaaacacaacttgacgagcaagccgtagaagggcatgag
gatggccaggaagagcctgttgtggtggatgctgactcaactgatagtgctgtacttgtt
aacggcagtgaggctgaggaagagtgggtgcttacgccaagtcagtga
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integrated database retrieval system
