Salvia splendens (scarlet sage): 121808117
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Entry
121808117 CDS
T07627
Name
(RefSeq) transcription factor IIIB 60 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspl03021
]
121808117
Transcription machinery [BR:
sspl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
121808117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
121808117
NCBI-ProteinID:
XP_042064416
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Position
6:complement(15618228..15627448)
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AA seq
612 aa
AA seq
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MVRIWCPFCAINVRTDTSDGKTCCSLCGRVLSEDNFTEEVQFTKSSDGQARMQGRFVASV
QSNSESRERTLNEAYNGINDIMYALEIDGGDYIASAALRLYKMALDKNFTKGRRKEQVQA
SCLYIVCRVKDKPFLLIDFSEHIRINVYVLGAVFLQLCKVLSLEETGLLQKLVDPSLFIH
RFADRLFRSKNQHISKTALQIVASMKRDWMQSGRKPSGICGAALYISALAHGLNCSKSDV
IKTVHICEATLTKRMIEFENTESGGLTIEEFEKKSKELAALANNVEDKFQMKSRSGELLC
SHKGDGKPQFAYGLCKDCYKEFMELSGGLNGGSEPPAFQRAERKRIMAEEAAADRSENLD
SSTLLELTETNSKHLNYDGQRSLKNTQDGATKLADPDLTGATLKPKTMHDTIDGRTDASD
ITLEESESLSDIDDFEVDVYINTEEEKILKTTVWEEINREYLEEQKAKEAAAVAAKKAYE
ASLANCSGDVEGARKLAEAAAAAAAQIRKEKRQKRAADLKNLGPPETAKDAFKQMLNGKP
WSSKIRYELLEQLIDSDEQSPKKSRNETKDEAETKAETDQDDYVEDDPEVDGAEDNTEEY
NYDQDINDLDEF
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggatatggtgtcctttctgtgccatcaacgttcggactgatacctctgatgga
aaaacttgctgttcactttgtgggagggttctatctgaagacaacttcacagaggaagtt
cagtttacgaaatcatctgatggacaggcacgcatgcaaggtcgttttgtggcgtctgtc
caatctaattcagagagtcgtgagaggacattgaatgaagcttataatggaataaatgat
ataatgtatgccttggaaattgacggtggtgattacatagctagtgcagcattacggtta
tataagatggcactagataagaacttcacaaaggggcgcaggaaagagcaagtgcaagct
tcttgtctttatattgtctgtagggttaaagataagccatttcttcttattgatttctca
gaacatataaggataaatgtctatgtgctaggggcggtctttttgcagctctgcaaagtt
cttagccttgaagaaactggtcttttgcaaaagcttgtggatcccagccttttcattcac
cgatttgctgatcgtctgtttagaagcaaaaaccaacatatttccaaaactgcacttcag
attgtggctagcatgaagcgtgattggatgcagagtggaaggaaaccaagtgggatatgt
ggagctgcactttatatatctgctctagcacatggtctcaattgttccaagtctgatgtt
attaagacggtccacatatgtgaagcaacattgacaaagcggatgattgaatttgagaat
accgagtcaggaggtctaacgattgaggagtttgagaagaaatccaaggaacttgccgct
ctggctaataatgttgaagacaaatttcaaatgaagtctaggagtggtgagcttctatgt
agtcataagggtgatgggaaacctcagtttgcttatggtctttgtaaggactgctacaag
gagttcatggaactttctggaggccttaatggtggatcagagcccccagctttccagcgt
gctgagaggaaaagaataatggccgaggaagctgccgctgatagatctgagaacctagat
tcatcaacattgctagaactgactgagaccaacagcaaacatttaaattatgatggacaa
aggagcctcaagaatactcaagatggagctacaaaactagcagatcctgatttaacagga
gccaccttgaagccaaaaaccatgcatgatactattgatggcagaacggatgctagtgat
attactttggaagagtcagagagtttatcggacattgatgactttgaggtggatgtgtat
attaatactgaggaggagaagattttgaaaacgactgtatgggaggagattaacagagaa
tatctcgaggagcagaaagcaaaagaagctgctgcagtagctgcaaagaaagcttatgaa
gccagtttagctaactgctccggtgatgttgaaggcgcaagaaagctcgctgaggcagct
gcagcagcagctgcacagattagaaaggaaaaacgacagaagcgagctgctgatttgaaa
aatctagggcctcctgaaactgctaaagacgcgtttaaacaaatgttaaatgggaagcct
tggagttctaaaattcgatacgagttactggagcagcttattgattcggatgagcagagc
cccaagaagagccggaatgagacgaaggatgaggcagagacgaaagcagaaacggatcaa
gacgattatgtggaagatgatcctgaagtagatggcgcggaagataatacagaagagtat
aattatgaccaagatattaacgatttggatgaattctag
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