KEGG   Salvia splendens (scarlet sage): 121808125
Entry
121808125         CDS       T07627                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121808125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sspl03021]
    121808125
Enzymes [BR:sspl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     121808125
Transcription machinery [BR:sspl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     121808125
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 121808125
NCBI-ProteinID: XP_042064423
LinkDB
Position
6:complement(8510717..8517845)
AA seq 1214 aa
MDGWDYIDEAGPSSINEKLTNGSTRMEFDDDLDFNCSESEDEVDCALQELDKSFLKGFCK
KASIAFFEQFGLISHQINSYNEFVKHGIQKVFDSVGEITIEPGYDPTKRGDGEWKRATLR
FGKVTLDHPTLWTGEKFSSTDGGKEFLELLPRHAHLQNMTYSSRIKVETHLQVYTESPSR
SDKFKTGVDIVVEKTILNEYQTDINFGRLPVMVKSDLCWMSRPEPDGKERRDCEFDQGGY
FVIKGAEKTFIAQEQICLKRLWVAKDPTWTIAYRPVAKRTRVYIKLVPKVEHLKAGDKIL
TVYFYAAEVPIWLLFFALGVPNDREVVKLIGLDTEEDSKIANILMPSIHDADKKFEGFRK
AGNAIGHIMKLMQGSKFPPTESLEVLIHTYLFPNLRSQRQKASFLAYMVKCLLDAYRGRR
KVDNRDDFRNKRVELAGELLERELSVHIKHAERRMIKAIQRDLYKDREVQSIDHYLDASI
ITNGLSRAFSTGAWVHPFKRMERMSGVVANLRRTNSLQAVCDMRRTRQQVSYTGRVGDAR
YPHPSHWGKVCFLSTPDGENCGLVKNLASLGLVSNNMLGRESILKKFLECGMENLVDDDC
CLLGGRHKVFLDGDWVGVCKDSSSFVAKLRHKRRKMEVPQQIEIKRDKHQDEVRIFADAG
RILRPLFVVQNLKKIKDLKGDFLFQSLLDNGIVEFIGPEEEEDCQTAWGIDYLFTAELDN
PPVKYTHCEFDSSFLLGLSCGIVPFANHDHARRVLYQSAKHSQQAMGYSTTNPSIRVDTN
SHQLYYPQRPLFRTMLSDCLGKSRYSEHHKGMMPRPDFFNGQSAIVAVNVHLGYNQEDSL
VMNRASLERGMFRTEHVRSYKAEVENSGAVGKRAKTDEFVSFGKMQSKIGHVDSLDDDGF
PFIGANLQTGDIVIGKYAASGVDHSIKLKHTERGMVQKVVLSANDEGKNFAVVSLRQVRS
PCLGDKFSSMHGQKGVLGFLESQENFPFTVEGIVPDIVINPHAFPSRQTPGQLLEAALGK
GIALGGGLKYATPFSTPSVEDITSQLHRLGYSRWGGERMYDGRTGEKVETLIFMGPTFYQ
RLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFT
LSDSSQMHICRKCKNVAGVIQRTVVGGRRVRGPYCRFCEAVEDVVRVNVPYGAKLLCQEL
FSMGISLKFETELC
NT seq 3645 nt   +upstreamnt  +downstreamnt
atggacgggtgggattatatagatgaagcaggacctagcagcataaacgagaagcttact
aatggttcgacacggatggaatttgatgatgatctagacttcaactgttctgaatctgaa
gatgaggtggactgtgccctgcaagaactggacaaaagcttcctgaaaggtttctgtaag
aaggcttcgatagcattttttgagcagtttggtttaattagccaccagataaattcctat
aatgaatttgtcaagcatgggatccaaaaagtctttgactctgttggggagattacaatt
gaacctggatacgaccctacaaaaaggggagatggtgagtggaagcgcgcaacactgagg
tttggaaaagtcacgcttgatcacccgacattgtggactggtgagaagttttcatcgact
gatggtggtaaagagtttttggagcttttgccgaggcatgctcatcttcagaatatgacc
tattcatccaggatcaaagttgagactcatcttcaggtgtatacagaaagtccatctaga
agtgacaaattcaaaactggtgtggatatagttgtagagaagacaatactgaacgagtat
cagactgatattaactttggcagactccctgtcatggtgaaatcggacttgtgctggatg
agtagacctgaacctgatggtaaagaaagaagagattgtgaatttgatcaaggaggttac
tttgttatcaagggggctgagaagacattcattgcccaggagcaaatatgccttaaaagg
ttgtgggtggctaaagatcctacctggaccattgcatatcgtccagtcgcgaaaaggaca
agagtgtatataaagttagttccaaaagtggaacatttgaaagccggagacaaaatcctt
actgtatatttttacgccgcagaggttcctatttggctcttgttctttgctttgggtgtt
ccaaatgatagagaggtggtcaagctgattggtctggacactgaggaggactctaaaatt
gcaaatatactcatgccatcaatacatgacgctgataagaaatttgaaggtttccgtaag
gctggcaatgcaatagggcatatcatgaagctgatgcagggcagtaagtttccacctaca
gaatctttggaggttttaatccacacctatctctttcccaaccttaggagccagcggcag
aaagcttcttttcttgcgtatatggtcaagtgcctgctagatgcctacagagggcgccgc
aaagttgacaacagagatgattttaggaacaagagggtggagttggctggtgaacttctt
gaacgagaactttccgtgcatatcaaacatgcggagaggcgaatgattaaggccatacag
agagacctttacaaagatagagaggtgcagtccatcgaccactacctggatgcctcgatc
atcactaatggtctttccagagccttttcaactggagcgtgggtgcacccttttaagaga
atggaaaggatgtctggtgtagtcgctaatctcaggcgaacaaattcattgcaggcagtg
tgtgatatgagaagaactcggcagcaggtctcatacacaggcagggttggtgatgctaga
tacccgcacccatctcactggggtaaggtttgctttctctctacaccagatggagaaaat
tgtggcctggttaagaatctggccagcctgggtcttgtcagtaataatatgctgggacga
gaaagcatccttaaaaaatttcttgagtgtggaatggagaacttggttgatgatgattgt
tgtttgctcggtggaaggcacaaagtttttctggatggagattgggttggagtgtgcaaa
gattcgtcatcatttgttgctaagctgagacacaagcgtcgcaaaatggaagtacctcag
cagattgagatcaaaagagataagcatcaggatgaagtgcgtatatttgctgatgctgga
aggatactgcgccctctctttgttgtccagaacttaaagaagattaaagatttgaaagga
gactttttatttcagtcgcttctggataatggcatagttgagttcataggaccagaggag
gaagaagattgtcaaactgcgtggggaattgactacctgttcactgctgagttagataac
ccacctgtgaagtatacccactgcgagtttgatagttcattccttctaggtttaagctgt
gggatagttccttttgccaatcatgatcatgctaggagagttctttaccaatctgccaag
cactctcagcaagccatgggatactcgaccacaaaccccagcattcgagttgatacaaat
tctcatcagctatactatccccaaaggcctcttttccgaactatgctatcagattgccta
gggaagtcgaggtactctgaacaccacaaggggatgatgccacggcctgatttcttcaac
ggccagagtgctattgtggctgtcaatgtccatcttggatacaatcaagaagattctctc
gtgatgaaccgtgcttctttagagcgtggcatgttcagaactgaacatgttaggagttat
aaagctgaagtcgaaaattcaggagcagtggggaaaagggccaagacagatgagtttgta
agttttggcaagatgcagagcaagattgggcatgttgacagccttgatgatgacggcttt
ccctttattggagcaaatctccaaactggtgacatagtcatcggtaagtatgctgcttcg
ggggtcgatcatagcatcaagctcaagcatacagaaaggggcatggttcaaaaggttgtg
ctgtcagcgaatgatgaaggaaagaactttgcggttgtatctttgagacaggttcgttct
ccatgcctgggggacaagttttcgagcatgcacgggcagaaaggtgttctggggtttctg
gagtctcaggagaactttccttttacagtagaaggaatagttccagacattgtgataaac
ccacatgcatttccttctcgacaaacgcccggacaacttttagaggcggccctaggtaaa
gggattgcactaggtggtggactaaaatatgcaaccccattttccactccttctgttgaa
gatataacgtcccaacttcacaggctagggtattcccgttggggaggggaaagaatgtac
gatggacgtacaggtgaaaaagtcgaaactcttattttcatgggtccgacattctaccag
cgtctcacacatatggctgaggacaaggtgaagttcaggaacactgggccggtgcaccct
cttacacgtcagcccgtggctgacaggaagcgtttcggtggtatcaagtttggtgagatg
gaacgagactgcctcatagcccacggtgcagcagccaacctgcacgagcggctgttcacc
ctcagtgattcgtctcagatgcacatatgcaggaagtgcaagaatgtggcgggtgtgatc
cagcgaacggtggttggtggtcggagggtccgggggccctattgtcgattctgtgaggct
gtcgaagatgtggtgagagtgaatgtgccttatggtgctaagctgctctgccaggagctc
ttcagcatggggatttcactcaaatttgagactgaattgtgctga

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