Salvia splendens (scarlet sage): 121808135
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Entry
121808135 CDS
T07627
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03420
Nucleotide excision repair
sspl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121808135
09124 Replication and repair
03420 Nucleotide excision repair
121808135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121808135
03400 DNA repair and recombination proteins [BR:
sspl03400
]
121808135
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspl04147
]
121808135
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
121808135
DNA repair and recombination proteins [BR:
sspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
121808135
TCR (transcription coupled repair) factors
Cul4-CSA complex
121808135
Exosome [BR:
sspl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121808135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Cpn60_TCP1
ORC5_lid
Motif
Other DBs
NCBI-GeneID:
121808135
NCBI-ProteinID:
XP_042064437
LinkDB
All DBs
Position
6:complement(7898771..7910447)
Genome browser
AA seq
820 aa
AA seq
DB search
MSHPTSSTSTSNPSKRSSSSPYSSAAAAPILSSMKKAKSHNTAHVHFSDSPALSPMIEDD
PTDAALEASSPSSAFGRTGAASAGGVTSNLSRKKATLPQPTKKLVIKLNKAKPMLPANFE
ENTWATLKSAISAIFLKQPNPCDLEKLYQAVNDLCLHKMGGSLYQRIEKACESYISASLQ
SLVGQSEDLVVFLSLVQKRWQDFCDQMLMIRGIALYLDRTYVKQTSNVRSLWDMGLQLFH
KHLSLASEVERKTVFGLLKMIESERLGEAVDRTLLNHLLKMFTALGIYPESFEKPFLEGT
TEFYAAEGVKYMQQADVPDYLKHVEMRLQEENERCLIYLDASTRKPLVATAERQLLVRHV
TAILDKGFMILMDGKRIEDLQRMYLLFSRVDALESLRQSLNQYIRITGQSIVMDEEKDRD
MVSSLLEFKANLDRIWEESFSKNEAFSNTIKDAFEHLINIRQNRPAELIAKFVDEKLRAG
NKGTSEEELEGTLDKVLVLFRYIQGKDVFEAFYKKDLAKRLLLSKSASIDAEKSMITKLK
TECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPM
DVRLPHELNVYQDIFKEFYLSKHSGRRLMWQNSLGHCVLKADFPKGKKELAVSLFQTVVL
MLFNDAQNLCFQDIKESTGIEDKELRRTLQSLACGKVRVLQKIPKGKDVDDDDSFVFNDQ
FTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITEL
FQQLKFPIKPGDLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccccacctcctctacctccacctccaatcccagcaagcgctcctcctcctcc
ccttattcctccgccgccgcagctccaattctctcctcgatgaagaaggccaagtcgcac
aatactgcacacgtccacttctccgactcccccgccctctccccgatgatcgaggacgat
cccaccgacgccgcgctcgaggcctcctccccctccagcgccttcggccgcactggcgcc
gcctccgccggcggcgtcacctccaatttgtcgcggaagaaagccaccctcccgcagcca
acaaagaagctcgtaattaagctcaataaagccaaaccgatgctaccagctaattttgag
gaaaatacatgggcaacacttaagtcggcaatcagcgccatatttttgaagcaacccaat
ccatgtgacctggagaaactctatcaggcggtaaatgacctttgcctgcacaaaatgggg
ggaagtctctatcaacggatcgaaaaggcgtgcgaaagctacatatccgcttcccttcaa
tctttggtcggccaaagtgaagacctggtggttttcttatcacttgtccagaagcggtgg
caggatttttgcgaccagatgctgatgatccggggtatagctttatatctcgatagaaca
tatgtgaagcaaacgtcgaatgttcgctcattgtgggacatgggcttgcagctttttcac
aaacatctttccctagcttcagaagtggagcgcaaaaccgtatttggtcttttaaaaatg
attgagagtgaaagattaggcgaagcagttgatagaactctccttaatcatctattgaag
atgtttactgcattgggtatttatccagaaagcttcgagaagccattccttgaaggtaca
actgagttttatgcagccgaaggtgtcaaatacatgcagcaagcagatgttccagattat
ttaaagcacgtagagatgaggttgcaagaagaaaatgaaagatgtctaatttacctggat
gcaagtacaaggaagccactcgtagcaactgcagaaaggcagctgctcgtgcgtcatgta
actgccattctcgacaagggtttcatgatacttatggatgggaagcgtattgaagacctt
cagaggatgtatcttctcttctctagagttgacgccctcgaatcattaaggcaatccctg
aatcaatacatccgaataactggccagagtattgtcatggatgaggagaaggacagagat
atggtatcgagcttattggaatttaaggctaatcttgatagaatatgggaagaaagcttc
tccaaaaatgaagcatttagcaacaccatcaaggatgcatttgagcatctcattaatatc
cggcagaatcggcctgctgagcttatcgcaaagtttgttgacgaaaagcttcgtgctgga
aacaagggtacctcagaagaggaattggagggtacacttgataaagtgttagtcttgttc
agatatatacagggcaaggatgtatttgaagctttctacaagaaagatcttgctaaaagg
ctcttgttgagtaaaagtgcttctattgatgcagagaagtctatgattactaagttgaaa
actgagtgtggcagtcaatttactaacaaactcgaaggaatgttcaaggacatcgaattg
tctaaagagattaacgaatcattcaagcaatcatctcaagctcggacaaaactcccatcc
gggatcgagatgagtgttcatgtcctaacaactgggtactggccgacatatccacccatg
gatgtcaggctcccacatgagctcaatgtttaccaggacatttttaaggagttttacttg
agcaagcatagtgggaggcgattgatgtggcaaaactcgttaggtcattgtgttcttaaa
gcagatttcccgaagggtaaaaaagaactcgcagtttctctgtttcagactgttgtattg
atgctgttcaatgatgcacaaaatctttgctttcaagatataaaagaatctacgggtatc
gaggataaagagctgaggaggactttgcagtcccttgcatgtgggaaggttcgcgtcctc
caaaaaattcccaaaggcaaagatgtggacgatgacgactcctttgtcttcaacgatcaa
tttactgctccactgtatcgtataaaggtaaatgcaatccaaatgaaggaaacagttgag
gagaacacgagcacaacggaaagggttttccaagatcgtcaatatcaggttgatgctgct
atcgttcgtataatgaagacgagaaaagtgctgagccacaccttactgatcaccgaactc
tttcagcagctgaagtttccgataaaaccgggtgacctgaagaagaggatcgagagcctc
attgaccgagagtacctggaacgtgacaaaaacaacccacaaatatacaactaccttgct
tga
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