Salvia splendens (scarlet sage): 121808294
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Entry
121808294 CDS
T07627
Name
(RefSeq) LEC14B homolog
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
sspl
Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sspl04121
]
121808294
Ubiquitin system [BR:
sspl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121808294
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Cytochrom_D1
Beta-prop_SCAP
WDR54
Motif
Other DBs
NCBI-GeneID:
121808294
NCBI-ProteinID:
XP_042064640
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Position
1:complement(2914384..2920532)
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AA seq
472 aa
AA seq
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MSRVRGYINPGVGFDEYAESRGYVRIGCADDEFAQVTKLRSTPHKHLRQVLPGESTAPLV
SPVQMMMGRECNYSGKGRFSTSDSCHVLSRYLPVRSTPSVIDKMTSCAYVSQFSDDGSLF
VAGFQESHIKIYDVDHGWKIHKDIHARSLRWTITDTSLSPDRRFLVYSSISPVVHIVDVG
SGTKQSHANVTEIHEGLEFSPNVDDYENYSFGIFSVKFSTDGREIVAASSDDAIYVYDLE
ARKLSLRIPAHRADVNSVCFADESGNIIYSGSDDRLCKVWDRRCLATKGQAAGVLMGHLE
GITFIDTRGDGRYFISNGKDQSIKLWDIRKMSSNVNYVPRRRYSEWDYRWMEYPEQARNL
KLPDDLSIATYKGHTVLRTLIRCYFSPAFSTGQRYIYTGSTDSCVYVYDVLSGDQVAKLD
YHEDPVRDCNWHPFYPMLVSSSWDGVVARWEFPDNGKTTSPAVPVGRRRFFY
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagtagggtgagaggatacattaatcctggagttggcttcgacgagtatgcagaatca
cgtggctatgtccgaataggctgtgccgatgatgaatttgcacaggtgacaaagttaagg
tccacgccacacaagcatctgaggcaggtgttgcctggagagagtactgcaccactcgtt
tcgccagtgcaaatgatgatgggtagagagtgcaactacagtgggaaagggaggttttct
acatcagattcttgtcatgttttgagccggtatttgcctgtccgtagtaccccctctgtg
attgataagatgacgagttgtgcatatgtgtcgcaattttctgatgatggttctcttttt
gttgctggatttcaggaaagtcatatcaaaatatatgacgttgatcatggatggaaaatt
cataaagatattcatgctaggagcttgaggtggactatcactgatacttctctgtcacca
gatcgtcgatttcttgtatattccagtatctctccagttgtccatattgtagacgttgga
tctggtacaaaacagtcgcatgcaaacgtgacggagattcatgaaggtcttgaattttca
cccaacgttgatgattatgagaactattcttttggcatcttctccgttaagttttctact
gatgggcgagaaattgttgctgctagcagtgacgatgcaatatatgtttatgatcttgaa
gccagaaagctaagcctccgaattccagctcatcgggctgatgtcaattctgtttgcttt
gcggatgaaagtggcaacatcatatattcgggaagcgatgatcgcctgtgcaaagtttgg
gacagacgttgccttgcaaccaaggggcaagctgctggagtcctgatgggacatttagaa
ggcatcacattcattgatacccgtggagatggacgttactttatctcaaatggaaaagat
caatccattaaactttgggacataaggaagatgtcatctaatgttaattacgtgccaaga
cgccgatattctgaatgggactatagatggatggaatatcctgaacaggctagaaatctg
aagcttcccgatgatctgtcaatagctacgtataagggacatactgtcttgcgcactctg
atacgctgttatttctcgccagcatttagcaccgggcaaaggtatatatatacgggatca
actgattcttgcgtttatgtttatgatgtgttgagtggcgatcaagttgcaaaactcgat
taccatgaggatccggtgcgggactgcaactggcacccgttctaccctatgctggtgagc
tcatcctgggatggtgtggttgcgcgttgggagttcccggataacgggaaaaccacgtca
ccggctgtaccagtcggaaggagacggtttttctactag
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